BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10e21 (514 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC11E3.15 |rpl22|SPAP8A3.01|60S ribosomal protein L22|Schizosa... 80 2e-16 SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 29 0.54 SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr 1|||M... 29 0.54 SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 3.8 SPBC409.04c |mis12||kinetochore protein Mis12|Schizosaccharomyce... 25 5.0 SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 25 5.0 SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 5.0 SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 5.0 >SPAC11E3.15 |rpl22|SPAP8A3.01|60S ribosomal protein L22|Schizosaccharomyces pombe|chr 1|||Manual Length = 117 Score = 80.2 bits (189), Expect = 2e-16 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Frame = +3 Query: 159 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVARD-KTKVAITADIPFS 335 K+ ID T D I DV FEKYL + +KV+GKT NL + VVV+R+ +K+A+ A I FS Sbjct: 11 KYIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFS 70 Query: 336 XXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 443 DWLRVV++ YELRY+ Sbjct: 71 GRYLKYLTKKFLKKHSLRDWLRVVSTKKGVYELRYY 106 >SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces pombe|chr 1|||Manual Length = 501 Score = 28.7 bits (61), Expect = 0.54 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = -3 Query: 329 RNVCGDSDFRLIPGDDNVIA*VICFALNFDVFLQVFLEVTY 207 R + G+S F ++P + IC L V +++F++ T+ Sbjct: 300 RGLVGESSFAVLPNIPPALTFYICLGLQITVLIKLFIKPTW 340 >SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr 1|||Manual Length = 172 Score = 28.7 bits (61), Expect = 0.54 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 143 LDAFAADFATLHSFFASLLVQLGFLS 66 +D + DFAT H+ + + L +GFLS Sbjct: 87 IDLYILDFATQHNLYVASLRNMGFLS 112 >SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces pombe|chr 1|||Manual Length = 1957 Score = 25.8 bits (54), Expect = 3.8 Identities = 10/37 (27%), Positives = 19/37 (51%) Frame = +3 Query: 159 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 269 K DC + + ++ + N +K + +HV E K + L Sbjct: 819 KLKTDCENLTQQNMTLIDNVQKLMHKHVNQESKVSEL 855 >SPBC409.04c |mis12||kinetochore protein Mis12|Schizosaccharomyces pombe|chr 2|||Manual Length = 259 Score = 25.4 bits (53), Expect = 5.0 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +2 Query: 275 SRCRRQG*DESRYHRRHSFFKEVPEVFNKTLPQEEQF 385 SR R + + ++ R SF +VPE + TLP+ F Sbjct: 135 SRKREKKTEIEKHLERISFLNKVPENWQVTLPETTDF 171 >SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr 2|||Manual Length = 1064 Score = 25.4 bits (53), Expect = 5.0 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -1 Query: 226 YFSKLPTSKILSSAGCVQSIVNFKLIFR-LMPLPRILPPFTPFL 98 ++ + ++ G +++I ++F L L RI+ PFTPF+ Sbjct: 729 WYIRFNRRRLKGEDGEIETINALNVLFEVLFTLVRIMGPFTPFI 772 >SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1573 Score = 25.4 bits (53), Expect = 5.0 Identities = 9/30 (30%), Positives = 20/30 (66%) Frame = +3 Query: 240 VKVEGKTNNLSNHVVVARDKTKVAITADIP 329 +K+ G NNL++++ + +T++ + DIP Sbjct: 1210 IKLVGMANNLNDNLELEEFRTRITNSMDIP 1239 >SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr 1|||Manual Length = 1778 Score = 25.4 bits (53), Expect = 5.0 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +3 Query: 204 DVGNFEKYLKEHVKVEGKTNNLSNH 278 + GN +KY + ++KV GK ++ H Sbjct: 955 EAGNLKKYDQPNLKVSGKNDSFVTH 979 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,763,410 Number of Sequences: 5004 Number of extensions: 30237 Number of successful extensions: 88 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 87 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 206265012 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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