Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e19
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.58 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.8  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   3.1  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   3.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   3.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -3

Query: 401 LIFQLPFLVT---LHLALLKQLCAYYLNHSNIV*YVHHLYI 288
           +IF + FL+     + A +  LC YY  ++ I+  VH L++
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFL 130



 Score = 24.2 bits (50), Expect = 0.77
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 395 FQLPFLV-TLHLALLKQLCAYYLNHSNIV*YVHHLYICA 282
           F   F++ T+HL  L  LC Y+   + I+  +H L+ CA
Sbjct: 149 FYCAFIIFTVHLLFL--LCIYHFFCAFIIFTMHLLFCCA 185


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 65  PYIKNNVYVLNAYIIMLDFIVH 130
           PY+K+  Y+     +++DFI +
Sbjct: 46  PYLKSYTYIKLVVSVLMDFIAY 67


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -2

Query: 294 LYMCITAEEAWHA*ATRAPIDQPNSFNKSLRSNIYCTVTFDILFYANI 151
           + + +  +E   + A R+P   P+ F K    +I C   +D   +A +
Sbjct: 18  MVLAVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQCKGVYDKSIFAKL 65


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -2

Query: 294 LYMCITAEEAWHA*ATRAPIDQPNSFNKSLRSNIYCTVTFDILFYANI 151
           + + +  +E   + A R+P   P+ F K    +I C   +D   +A +
Sbjct: 18  MVLAVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQCKGVYDKSIFAKL 65


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -2

Query: 294 LYMCITAEEAWHA*ATRAPIDQPNSFNKSLRSNIYCTVTFDILFYANI 151
           + + +  +E   + A R+P   P+ F K    +I C   +D   +A +
Sbjct: 18  MVLAVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQCKGVYDKSIFAKL 65


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 423 LCNIEFSFNFSATFLSDSSFGTSKTTLCILSKS 325
           +   EF+ NF+ +++  + F T  T L I++ S
Sbjct: 247 IAGYEFNANFTISYILFALFNTFGTILLIMTCS 279


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +2

Query: 419 HKLWIEQPENIPTCLAIKPY 478
           H  W+    NI  CL   P+
Sbjct: 316 HASWVNHLSNIEDCLNYVPH 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,326
Number of Sequences: 336
Number of extensions: 2820
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)