Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e19
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-7|AAF60890.4| 211|Caenorhabditis elegans Hypothetical ... 121 3e-28
Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.56
AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein. 31 0.56
AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical ... 31 0.56
U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical pr... 30 1.3
U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical pr... 29 1.7
U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase p... 29 3.0
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 27 6.9
Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 27 9.1
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 27 9.1
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 27 9.1
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ... 27 9.1
>AC024876-7|AAF60890.4| 211|Caenorhabditis elegans Hypothetical
protein Y94H6A.7 protein.
Length = 211
Score = 121 bits (292), Expect = 3e-28
Identities = 54/113 (47%), Positives = 80/113 (70%)
Frame = +2
Query: 185 VQYILLRSDLLKEFGWSIGALVAQACHASSAVMHIYKDDEHTIQYLNDLDNMHKVVLEVP 364
V Y++LR DL + GW +GA+ QA HA+SA M I+++D +T Y ++LD+MHKV L V
Sbjct: 101 VMYVILRRDLQTKLGWPLGAVCTQAAHAASASMWIFRNDPNTEAYTSNLDSMHKVTLGVD 160
Query: 365 NEESLRKVAEKLKENSILHKLWIEQPENIPTCLAIKPYPKDEVKKYVGKFKLY 523
+EE ++KVA+KL ++ HK+WIE + P C+A+KPYPK+EVK + KL+
Sbjct: 161 SEEEIKKVADKLTARNVDHKVWIE--DGFPVCIALKPYPKEEVKNALKGLKLF 211
>Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical
protein C23H4.1 protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 290 YKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENIPTCLAI 469
YKDD+ ++YL + H V + PN E + + + N L +L EQ P A+
Sbjct: 107 YKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEHQDELNQWLEQLMNEQELLEPANAAV 166
Query: 470 K 472
K
Sbjct: 167 K 167
>AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 290 YKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENIPTCLAI 469
YKDD+ ++YL + H V + PN E + + + N L +L EQ P A+
Sbjct: 107 YKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEHQDELNQWLEQLMNEQELLEPANAAV 166
Query: 470 K 472
K
Sbjct: 167 K 167
>AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical
protein T10B5.2 protein.
Length = 380
Score = 31.1 bits (67), Expect = 0.56
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Frame = +2
Query: 188 QYILLRSDLLKEFGWSIGALVAQACHASSAVMHIYKDDEHTIQYLNDL-----DNMHKVV 352
QY+ L+ L + W +G LV + +H+ + + I L+ + +N VV
Sbjct: 210 QYLNLQYILTPQLHWDLGFLVQNTTLDLYSAVHLIQQTFYCISDLHKVCLHQRNNTSIVV 269
Query: 353 L-EVPNEESLRKVAEKL--KENSILHKLWIEQPENIPTCLAIKPYPKDEVKKYVGK---F 514
L N E+ + + + +++ L L+++Q + L +P PK+ + Y+ + F
Sbjct: 270 LNNFFNSETRQNIRRNICTTKHNGLQPLYVQQARHARNKLEREPLPKNVINTYLSRRQHF 329
Query: 515 KLYKG 529
+L +G
Sbjct: 330 RLARG 334
>U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical
protein B0261.4b protein.
Length = 216
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 233 SIGALVAQACHASSAVMHIYKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAE--KLKE 406
S+ +LV+ A + +AV + Q+ +D N K L + AE +LK
Sbjct: 4 SLPSLVSSAVRSQNAVNTRFSSTMK--QFFDDEANFGKAELRPKHRPGRSWTAEELRLKS 61
Query: 407 NSILHKLW 430
NS LHKLW
Sbjct: 62 NSDLHKLW 69
>U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical
protein B0261.4a protein.
Length = 234
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 233 SIGALVAQACHASSAVMHIYKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAE--KLKE 406
S+ +LV+ A + +AV + Q+ +D N K L + AE +LK
Sbjct: 22 SLPSLVSSAVRSQNAVNTRFSSTMK--QFFDDEANFGKAELRPKHRPGRSWTAEELRLKS 79
Query: 407 NSILHKLW 430
NS LHKLW
Sbjct: 80 NSDLHKLW 87
>Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical
protein C48D1.1a protein.
Length = 631
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/100 (23%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +2
Query: 125 VHISTLQKAILA*NKMSNVTVQYILLRSD--LLKEFGWSIGALVAQACHASSAVMHIYKD 298
V I + +A+L N+ + +QY+ + D L+K + IG ++ H + + +HI +D
Sbjct: 106 VDIVRILEAVL--NEETRKNLQYLHIEKDQKLMKRWTAKIGNMLPSLTHLTMSDVHINED 163
Query: 299 DEHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSIL 418
D + Q + N+ + + N ++ ++ +LK+ +L
Sbjct: 164 DFY--QLFGNFSNLRSLDISGTNILNIAGIS-RLKQLEVL 200
>U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical
protein F22D3.6 protein.
Length = 639
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 392 EKLKENSILHKLWIEQPENIPTCLAIKPYPKDE 490
E+L EN++ H+ ++E PE + C ++ Y DE
Sbjct: 552 EELSENALNHRAFVEFPEEL-HCSDVREYNDDE 583
>AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase
protein.
Length = 639
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 392 EKLKENSILHKLWIEQPENIPTCLAIKPYPKDE 490
E+L EN++ H+ ++E PE + C ++ Y DE
Sbjct: 552 EELSENALNHRAFVEFPEEL-HCSDVREYNDDE 583
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 428 WIEQPENIPTCLAIKPYPKDEVKK 499
W+ Q + PTC P P+D++++
Sbjct: 362 WLAQDSSCPTCRCTIPSPQDQIRQ 385
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 428 WIEQPENIPTCLAIKPYPKDEVKK 499
W+ Q + PTC P P+D++++
Sbjct: 362 WLAQDSSCPTCRCTIPSPQDQIRQ 385
>Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical
protein Y7A9C.8 protein.
Length = 310
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 63 YRTLKIMFMF*MHI*LCLILLFISQHFRKLYWHKIKC 173
Y +K F + + LC+ LLF++ HF ++ + + C
Sbjct: 62 YEMVKFTFYLLVLLILCIPLLFVATHFSEIAVYLVIC 98
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 375 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 277
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 375 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 277
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 375 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 277
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 375 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 277
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
protein K02F6.4 protein.
Length = 1193
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 308 TIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENI 451
T +LN L N+ V ++ NE L+K+A K + I+ K ++ E +
Sbjct: 294 TSGFLNGLGNVQAVKKDLNNEWFLKKIARNDKSSLIVLKQYLRFFETV 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,000,129
Number of Sequences: 27780
Number of extensions: 245271
Number of successful extensions: 795
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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