Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e19
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   1.6  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   1.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   1.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   3.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.8  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   6.3  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   6.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   8.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 465 AKQVGMFSGCSIHNL 421
           AKQVG F GC   N+
Sbjct: 252 AKQVGAFMGCPTRNV 266


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 465 AKQVGMFSGCSIHNL 421
           AKQVG F GC   N+
Sbjct: 123 AKQVGAFMGCPTRNV 137


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 465 AKQVGMFSGCSIHNL 421
           AKQVG F GC   N+
Sbjct: 252 AKQVGAFMGCPTRNV 266


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/36 (25%), Positives = 22/36 (61%)
 Frame = +2

Query: 293 KDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKL 400
           KD++ + + +   D++ K +++     + R++AEKL
Sbjct: 58  KDEKRSGRPVEVDDDLIKAIIDSDRHSTTREIAEKL 93


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 305 HTIQYLNDLDNMHK 346
           H   +LN LDN+H+
Sbjct: 92  HVRDFLNGLDNLHE 105


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 78  IMFMF*MHI*LCLILLFISQHFRKLYWHKI 167
           I  M  + I +C+ ++ ++ HFR    HK+
Sbjct: 312 IFAMILVSISICVTVVVLNVHFRSPQTHKM 341


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 78  IMFMF*MHI*LCLILLFISQHFRKLYWHKI 167
           I  M  + I +C+ ++ ++ HFR    HK+
Sbjct: 312 IFAMILVSISICVTVVVLNVHFRSPQTHKM 341


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 305 HTIQYLNDLDNMHKVVLEV 361
           +TIQ L  L+NM+K   EV
Sbjct: 583 NTIQELYTLNNMYKPTREV 601


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,595
Number of Sequences: 438
Number of extensions: 2814
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)