Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e17
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted ...    24   4.1  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   7.2  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   7.2  

>DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 226 EGTILNFNRVFVASKVTNLIPCRHISRGFDVF 131
           EGT L    V V++  T L PC  +S  + ++
Sbjct: 23  EGTFLAHIPVDVSTLTTTLHPCNRLSNSYGLW 54


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 350 RIPSKIRMLFPHH 312
           R P K+R L PHH
Sbjct: 34  RRPRKVRKLLPHH 46


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 422 HKKLREHFNQ*FQNLQMLGCSG 487
           ++K+RE     + NLQ  GC G
Sbjct: 262 NQKVREKDESIYANLQQYGCGG 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,370
Number of Sequences: 2352
Number of extensions: 10972
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)