Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e17
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical pr...    60   1e-09
Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical ...    28   4.2  
AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical ...    28   4.2  
AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical...    28   4.2  
AF016683-3|AAB66193.1|  497|Caenorhabditis elegans Hypothetical ...    28   4.2  
AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical ...    28   4.2  
AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical ...    28   4.2  
Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical p...    28   5.6  
AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical...    28   5.6  
AF016657-2|AAB93652.1|  366|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC199169-13|ABO33252.1|  103|Caenorhabditis elegans Hypothetical...    27   7.4  
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical ...    27   9.7  
AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical
           protein K01G5.10 protein.
          Length = 248

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
 Frame = +3

Query: 168 IRLVTFDATNTLLKFKMVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPNFGRN 347
           +++++ DA +TL+  K  P   Y++ AR Y              +N+K M    P FG N
Sbjct: 19  VKVLSLDARDTLITMKESPPIVYSRFARQYDLEVDSDQIMGSFLKNYKRMSIASPCFGFN 78

Query: 348 SILWEEWWRQVVKLTLQDHLPVGADTR--SLGNTLINDFKTSKCWDVAAGSDT--LLQXX 515
            I  + WW +VV  TL D  P     R   +   L N + T + W +   SDT   LQ  
Sbjct: 79  GIGNKSWWIEVVSSTLLDCAPDSEKGRVEVIAGALYNHYATPEPWKLVE-SDTRQTLQKL 137

Query: 516 XXXXXXXXXXSNSDPRLYDIL 578
                     SN D RL  +L
Sbjct: 138 RLKGIILVVISNFDSRLKSLL 158


>Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical
           protein K02B7.2 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 350 RIPSKIRMLFPHHFKV-FPH 294
           R+PS + MLF HH KV F H
Sbjct: 302 RLPSVVNMLFKHHIKVRFDH 321


>AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical
           protein W03G1.3 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 350 RIPSKIRMLFPHHFKV-FPH 294
           R+PS + MLF HH KV F H
Sbjct: 325 RLPSVVNMLFKHHIKVRFDH 344


>AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical
           protein C17B7.13 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 350 RIPSKIRMLFPHHFKV-FPH 294
           R+PS + MLF HH KV F H
Sbjct: 325 RLPSVVNMLFKHHIKVRFDH 344


>AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical
           protein K02E7.2 protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 350 RIPSKIRMLFPHHFKV-FPH 294
           R+PS + MLF HH KV F H
Sbjct: 322 RLPSVVNMLFKHHIKVRFDH 341


>AF016683-3|AAB66193.1|  497|Caenorhabditis elegans Hypothetical
           protein K09F6.2 protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 350 RIPSKIRMLFPHHFKV-FPH 294
           R+PS + MLF HH KV F H
Sbjct: 396 RLPSVVNMLFKHHIKVRFDH 415


>AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical
           protein R09E12.5 protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 350 RIPSKIRMLFPHHFKV-FPH 294
           R+PS + MLF HH KV F H
Sbjct: 322 RLPSVVNMLFKHHIKVRFDH 341


>AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical
           protein Y55F3C.11 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 350 RIPSKIRMLFPHHFKV-FPH 294
           R+PS + MLF HH KV F H
Sbjct: 266 RLPSVVNMLFKHHIKVRFDH 285


>Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical
           protein Y49E10.25 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 314 HFKVFPHLILSITFASPVTICTCNLCV 234
           H  +FP LIL I+   P T   C+ C+
Sbjct: 6   HLSIFPLLILCISHVIPTTPGLCSRCI 32


>AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical
           protein Y75B8A.5 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = +3

Query: 156 CLQGIRLVTFDATNTLLKFKMVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPN 335
           C +  + VT +    +     +PS Y + + R    R  E ++  KM +  ++ +E +PN
Sbjct: 43  CDEDKQQVTCEGQQVVTLPDRLPSGYESLVIRNSSVRTIEKNSFRKMEKLMQIEFENNPN 102

Query: 336 FG 341
            G
Sbjct: 103 LG 104


>AF016657-2|AAB93652.1|  366|Caenorhabditis elegans Hypothetical
           protein C16C4.6 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 377 LSPPFFPEDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNL 240
           +S P FP  R+PSK       HF +    +LS +  SP ++ + N+
Sbjct: 57  MSSPSFPVLRLPSKALRATLQHFAIID--LLSFSLISPNSVRSLNI 100


>AC199169-13|ABO33252.1|  103|Caenorhabditis elegans Hypothetical
           protein F38A1.13 protein.
          Length = 103

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 381 VKLTLQDHLPVGADTRSLGNTLIND 455
           V LT+QDHLP+ +  RSL  ++ ND
Sbjct: 16  VTLTIQDHLPIDS-FRSLNLSITND 39


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 122 NPKKD-VKSP*DVSAGYKVSHFRCDEHPIKIQNGTLAILHKDCTYIWLQGKRK 277
           NPK D ++S  DV++  ++  +RC+ + +  +  +   + KD   +W +  +K
Sbjct: 680 NPKTDDIQSKDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKK 732


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 122 NPKKD-VKSP*DVSAGYKVSHFRCDEHPIKIQNGTLAILHKDCTYIWLQGKRK 277
           NPK D ++S  DV++  ++  +RC+ + +  +  +   + KD   +W +  +K
Sbjct: 677 NPKTDDIQSKDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKK 729


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 312 MMWEQHPNFGRNSILWEEWWRQV 380
           M+ +QHP++ R S  W EW + +
Sbjct: 694 MLQKQHPSYDRISEQWPEWKKAI 716


>AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical
           protein H17B01.1b protein.
          Length = 510

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 325 SILILEGILSSGKNGGDKWSS 387
           S L+L G L+   +GGDKW+S
Sbjct: 384 STLLLVGALTIQNSGGDKWAS 404


>AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical
           protein H17B01.1a protein.
          Length = 492

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 325 SILILEGILSSGKNGGDKWSS 387
           S L+L G L+   +GGDKW+S
Sbjct: 366 STLLLVGALTIQNSGGDKWAS 386


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,702,270
Number of Sequences: 27780
Number of extensions: 252385
Number of successful extensions: 572
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)