Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e15
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              91   9e-21
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    27   0.22 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.51 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.8  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   4.8  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   4.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.8  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   8.3  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    21   8.3  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   8.3  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.3  

>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 91.1 bits (216), Expect = 9e-21
 Identities = 35/57 (61%), Positives = 42/57 (73%)
 Frame = +2

Query: 461 ECAFCKKNGESVSWYRTHALKDGRGRVKCPVLRGFRCPRCGATGDRAHTIKYCPQNS 631
           EC FC+ NGE  ++YR H LKD  GRV CPVLR + CP CGA GD AHT+KYCP+ +
Sbjct: 39  ECVFCRNNGEEEAYYRKHLLKDADGRVSCPVLRAYTCPICGACGDIAHTVKYCPKGT 95


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 210 NWIPQFWRHK*QWKREKSMEPILHKLKFLHKEVNY 314
           NW+  FW    QW  E+  +  LH+      ++NY
Sbjct: 163 NWLSVFWGSAWQWNEERK-QYYLHQFATGQPDLNY 196


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 449 QKHFECAFCKKNGESVSWYRTHALKDGRGRVKCPVLRGFRCPRCGAT 589
           +K ++C  C+K  +  + Y++H    G+   + P    +RC  CG T
Sbjct: 59  EKTYQCLLCQKAFDQKNLYQSHLRSHGK-EGEDP----YRCNICGKT 100


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 637 LIGVLWAIFNGVSSVPGGPTAR 572
           L+G++W +   +S   G P A+
Sbjct: 5   LVGIMWIVLVLISGCSGNPDAK 26


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 275 NRFHRFFSFPLLFVPPKLRDPVSQPVRHLFSKCIHFPKTL 156
           N+F   F   L     K     S+P R ++S  + +P+++
Sbjct: 353 NKFREAFKLMLPNCCGKWSSQKSEPRRSIYSSLLRYPRSI 392


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 653 HLFLAICCXCC 685
           H+ ++ CC CC
Sbjct: 6   HVVMSCCCWCC 16


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 464 CAFCKKNGESVSWYRTHALKDGRGRVK 544
           C   +KNGE+    + HA+K    +VK
Sbjct: 163 CEKYEKNGETYLRIKKHAVKFNPAKVK 189


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 345 FLKSTRRASAGNSLPCEET 289
           FL STR A  G    C+E+
Sbjct: 239 FLSSTRTAETGTIRKCDES 257


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 515 HAFCTMTLTPHFSYRRRTQNAFVNQFASGEELRR 414
           H    + +TP F  +R  + A +    +GE L R
Sbjct: 399 HTIPEVKVTPRFQAKRLKEEANIRCHVAGEPLPR 432


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 110 FEEILPSTSAYIKK 151
           FEEI    S+YIKK
Sbjct: 167 FEEIKKEVSSYIKK 180


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 110 FEEILPSTSAYIKK 151
           FEEI    S+YIKK
Sbjct: 94  FEEIKKEVSSYIKK 107


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 110 FEEILPSTSAYIKK 151
           FEEI    S+YIKK
Sbjct: 110 FEEIKKEVSSYIKK 123


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 110 FEEILPSTSAYIKK 151
           FEEI    S+YIKK
Sbjct: 167 FEEIKKEVSSYIKK 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,492
Number of Sequences: 438
Number of extensions: 4444
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)