Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e14
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.096
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.096
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   0.39 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   3.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   4.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   8.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.2 bits (55), Expect = 0.096
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 347 PHPQVXPHAPEMETEPT-AQAGPRE 276
           PHP + PH P + + P     GP++
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGPKQ 256


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.096
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 347 PHPQVXPHAPEMETEPT-AQAGPRE 276
           PHP + PH P + + P     GP++
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGPKQ 148


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 342 SAGGSACARDGDRTDSAG 289
           S GG    RDGDR D  G
Sbjct: 91  SGGGRGGGRDGDRGDGGG 108


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 184 PASVTWPWLANSPWSAPA 237
           P  +   W ANSP S PA
Sbjct: 59  PGLLPLAWQANSPPSPPA 76


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 190 SVTWPWLANSPWSAPA 237
           S+T+P     P++APA
Sbjct: 2   SITYPQYPQHPYAAPA 17


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 4/18 (22%), Positives = 10/18 (55%)
 Frame = +3

Query: 12  YFVVFAICIQACLFHNVY 65
           ++  + +C+  C+F   Y
Sbjct: 156 FYYTYFLCVIVCIFRGKY 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,851
Number of Sequences: 336
Number of extensions: 918
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)