Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e14
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical pr...    30   0.52 
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ...    27   2.8  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    27   3.7  
Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z50797-8|CAL36515.1|  291|Caenorhabditis elegans Hypothetical pr...    27   3.7  
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    27   3.7  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    27   3.7  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z81086-1|CAB03120.2|  258|Caenorhabditis elegans Hypothetical pr...    26   6.4  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    26   6.4  
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    26   6.4  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    26   6.4  
AL023844-7|CAA19533.1|  346|Caenorhabditis elegans Hypothetical ...    26   6.4  
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    26   8.5  
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot...    26   8.5  

>U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical
           protein ZK84.1 protein.
          Length = 801

 Score = 29.9 bits (64), Expect = 0.52
 Identities = 25/93 (26%), Positives = 33/93 (35%)
 Frame = -3

Query: 341 PQVXPHAPEMETEPTAQAGPRELDRADDGHLSHYSAGADHGEFASHGHVTDAGAAVPSTA 162
           P   P A E     T  A P   +  D       +A A   E A     TD+ A+  +TA
Sbjct: 285 PAPAPTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTA 344

Query: 161 AVPDRTVPRSTERSAIWT*RRSTGTHTTQALTV 63
           A+ D +       S          T TT A +V
Sbjct: 345 ALVDTSSSEHAAESTEAPATDIAATETTPAPSV 377


>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
           protein M01E10.2 protein.
          Length = 1286

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 23/82 (28%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
 Frame = -3

Query: 323 APEMETEPTAQAGPRELDRADDGHLSHYSAGADHGEFASHGHVTDAGAAVPSTAAVPDRT 144
           AP  E  PT Q  P    R  DG + H   G    E              P T      T
Sbjct: 332 APPTEAPPTTQTTPTSWTRPTDGRV-HVMPGIRVTETPPTIQTPPPTTQTPPTTQTSSTT 390

Query: 143 -VPRSTERSAIWT*RRSTGTHT 81
             PR+ +  A WT   +T   T
Sbjct: 391 QTPRTKQTWAPWTPPTTTTRQT 412


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical protein
            T22H6.6a protein.
          Length = 1405

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 218  EFASHGHVTDAGAAVPSTAAVPDRTVPRSTERSAI 114
            +F S  +VT   A  P T  +  +T P   ERS+I
Sbjct: 1268 QFLSRDNVTPQSACTPMTPMMSGQTTPMFGERSSI 1302


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
            protein T22H6.6a protein.
          Length = 1405

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 218  EFASHGHVTDAGAAVPSTAAVPDRTVPRSTERSAI 114
            +F S  +VT   A  P T  +  +T P   ERS+I
Sbjct: 1268 QFLSRDNVTPQSACTPMTPMMSGQTTPMFGERSSI 1302


>Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical
           protein T22H6.6b protein.
          Length = 640

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 218 EFASHGHVTDAGAAVPSTAAVPDRTVPRSTERSAI 114
           +F S  +VT   A  P T  +  +T P   ERS+I
Sbjct: 503 QFLSRDNVTPQSACTPMTPMMSGQTTPMFGERSSI 537


>Z50797-8|CAL36515.1|  291|Caenorhabditis elegans Hypothetical
           protein T22H6.6c protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 218 EFASHGHVTDAGAAVPSTAAVPDRTVPRSTERSAI 114
           +F S  +VT   A  P T  +  +T P   ERS+I
Sbjct: 154 QFLSRDNVTPQSACTPMTPMMSGQTTPMFGERSSI 188


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 347 PHPQVXPHAPEMETEPTAQAGPR 279
           P PQV P APE   E +A   P+
Sbjct: 401 PQPQVIPQAPETFVETSAPVAPQ 423


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 347 PHPQVXPHAPEMETEPTAQAGPR 279
           P PQV P APE   E +A   P+
Sbjct: 401 PQPQVIPQAPETFVETSAPVAPQ 423


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 266 ADDGHLSHY-SAGADHGEFASHGH 198
           A  GH  H+ S G  HG   SHGH
Sbjct: 572 AHHGHHGHHGSHGVHHGHHESHGH 595



 Score = 26.6 bits (56), Expect = 4.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 254 HLSHYSAGADHGEFASHGH 198
           H  H+ A A HG   SHGH
Sbjct: 429 HGEHHHAPAHHGHHESHGH 447


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -1

Query: 283 PANSTAPMTGTC--PITALEPTTGSSPATAT 197
           P N T+P T     P+T   PTT +S  T T
Sbjct: 666 PVNPTSPTTAPTVPPVTTTTPTTTTSTTTTT 696


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -1

Query: 283 PANSTAPMTGTC--PITALEPTTGSSPATAT 197
           P N T+P T     P+T   PTT +S  T T
Sbjct: 722 PVNPTSPTTAPTVPPVTTTTPTTTTSTTTTT 752


>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -1

Query: 283 PANSTAPMTGTC--PITALEPTTGSSPATAT 197
           P N T+P T     P+T   PTT +S  T T
Sbjct: 545 PVNPTSPTTAPTVPPVTTTTPTTTTSTTTTT 575


>Z81086-1|CAB03120.2|  258|Caenorhabditis elegans Hypothetical
           protein F53B6.1 protein.
          Length = 258

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 62  VQSVLGSCGSRWTSFRSIWRTSRW 133
           +QS    CG   T    IW+TS+W
Sbjct: 151 LQSNFKCCGVNGTDNAQIWKTSKW 174


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 274 STAPMTGTCPITALEPTTGSSPATAT 197
           +T P T T P T    TT ++P T T
Sbjct: 238 TTTPTTTTTPATTTSETTTTTPTTTT 263


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -3

Query: 194 TDAGAAVPSTAAVPDRTVPRSTERSAIWT*RRSTGTHTTQALTVHIMEQASLDTDREHNE 15
           T     +PST  + + +   ST  S   T R  T T+TT+  +VH   +     DR H++
Sbjct: 134 TTTTTTIPSTTTMTESS-STSTTASPTTT-RIRTWTYTTRYPSVHDPNRHRYGQDRIHHQ 191

Query: 14  VRH 6
             H
Sbjct: 192 HHH 194


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -3

Query: 194 TDAGAAVPSTAAVPDRTVPRSTERSAIWT*RRSTGTHTTQALTVHIMEQASLDTDREHNE 15
           T     +PST  + + +   ST  S   T R  T T+TT+  +VH   +     DR H++
Sbjct: 134 TTTTTTIPSTTTMTESS-STSTTASPTTT-RIRTWTYTTRYPSVHDPNRHRYGQDRIHHQ 191

Query: 14  VRH 6
             H
Sbjct: 192 HHH 194


>AL023844-7|CAA19533.1|  346|Caenorhabditis elegans Hypothetical
           protein Y48A6B.9 protein.
          Length = 346

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 195 NVAVAGELPVVGSSAVMGQVPVIGA 269
           N AV  ELPV+G S  +G+V   G+
Sbjct: 58  NYAVRAELPVIGGSEGVGRVVKAGS 82


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 286 DPANSTAPMTGTCPITALEPTTGSSPATA 200
           +PA   AP     P  AL P T  +PA A
Sbjct: 182 EPAPEPAPAPAPAPEAALAPETAPAPAPA 210


>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical
           protein T06E4.3b protein.
          Length = 2514

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 23  VRDLYPGLPVP*CVQSVLGSCGSRWTSFRSI 115
           V+ + P L +P C Q      GS+W +FR I
Sbjct: 462 VKQIIPFLLIP-CFQDFRDRVGSKWDNFRFI 491


>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical
           protein T06E4.3a protein.
          Length = 2531

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 23  VRDLYPGLPVP*CVQSVLGSCGSRWTSFRSI 115
           V+ + P L +P C Q      GS+W +FR I
Sbjct: 462 VKQIIPFLLIP-CFQDFRDRVGSKWDNFRFI 491


>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
           protein.
          Length = 2514

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 23  VRDLYPGLPVP*CVQSVLGSCGSRWTSFRSI 115
           V+ + P L +P C Q      GS+W +FR I
Sbjct: 462 VKQIIPFLLIP-CFQDFRDRVGSKWDNFRFI 491


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,252,969
Number of Sequences: 27780
Number of extensions: 91657
Number of successful extensions: 448
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)