Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e13
         (526 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000519A16 Cluster: PREDICTED: similar to F-box and ...    33   5.3  
UniRef50_Q75EQ7 Cluster: AAR022Wp; n=2; Saccharomycetaceae|Rep: ...    33   5.3  
UniRef50_A5DXB4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_UPI0000519A16 Cluster: PREDICTED: similar to F-box and
           leucine-rich repeat protein 2 isoform 2; n=1; Apis
           mellifera|Rep: PREDICTED: similar to F-box and
           leucine-rich repeat protein 2 isoform 2 - Apis mellifera
          Length = 447

 Score = 32.7 bits (71), Expect = 5.3
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +1

Query: 313 TEDGIPIRKLYVTNL 357
           TEDG+PIRKL++TNL
Sbjct: 29  TEDGVPIRKLFITNL 43


>UniRef50_Q75EQ7 Cluster: AAR022Wp; n=2; Saccharomycetaceae|Rep:
           AAR022Wp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 114

 Score = 32.7 bits (71), Expect = 5.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 289 GIRSVPTKTEDGIPIRKLYVTNLPPKVKLWTV 384
           G+R  PT  E G+P   LY++NL  +VK+ T+
Sbjct: 17  GVRPSPTADEPGMPRSTLYISNLNDQVKISTL 48


>UniRef50_A5DXB4 Cluster: Putative uncharacterized protein; n=1;
            Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
            uncharacterized protein - Lodderomyces elongisporus
            (Yeast) (Saccharomyces elongisporus)
          Length = 1562

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +1

Query: 187  IMYNDEEDNERYFSPDLLHVVRIATISNLEL--APYGIRSVPTKTEDG 324
            +++  E +N  Y SP+L+    ++T+ NLEL  APY   S+    E+G
Sbjct: 1326 VLFPQELENVVYMSPNLICRADLSTLVNLELYNAPYAFPSMCEDKENG 1373


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,952,336
Number of Sequences: 1657284
Number of extensions: 9340437
Number of successful extensions: 18937
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18935
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)