Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e13
         (526 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0128 + 13195958-13196011,13196399-13196407,13197257-131973...    28   5.3  
03_03_0097 + 14386262-14386532,14387696-14387919,14388057-143883...    28   5.3  

>10_07_0128 +
           13195958-13196011,13196399-13196407,13197257-13197337,
           13197375-13197856,13198287-13198323,13198425-13198529
          Length = 255

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 205 EDNERYFSPDLLHVVRIATISNLELAPYGIRSVPTKTE 318
           +DNE  +    LH  R+  +S L++ PY +  V    E
Sbjct: 11  QDNENGYQARKLHYYRMIALSPLDIPPYNLLPVDVMLE 48


>03_03_0097 +
           14386262-14386532,14387696-14387919,14388057-14388307,
           14388393-14388771,14388958-14389389
          Length = 518

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 196 NDEEDNERYFSPDLLHVVRIATISNLELAPYGIRSVPTK 312
           N E+  E + +   L  + IATI NL+L   G + +PTK
Sbjct: 218 NSEKGKEVFHAQKQLQAIAIATILNLQLP--GFKYLPTK 254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,587,962
Number of Sequences: 37544
Number of extensions: 231395
Number of successful extensions: 370
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)