Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e13
         (526 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094824-1|AAM11177.1|  604|Drosophila melanogaster LD37241p pro...    28   8.9  
AE014296-3742|AAF51882.1|  604|Drosophila melanogaster CG11128-P...    28   8.9  
AE014296-3741|AAF51880.1|  604|Drosophila melanogaster CG11128-P...    28   8.9  
AE014296-3740|AAF51881.1|  604|Drosophila melanogaster CG11128-P...    28   8.9  

>AY094824-1|AAM11177.1|  604|Drosophila melanogaster LD37241p
           protein.
          Length = 604

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 398 GFYIITVQ-SFTLGGKLVT*SFLIGIPSSVFVGTLLIPYGA 279
           G Y++  Q +F + G  VT SFLI   +S F G     + A
Sbjct: 44  GVYVLAGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFAA 84


>AE014296-3742|AAF51882.1|  604|Drosophila melanogaster CG11128-PC,
           isoform C protein.
          Length = 604

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 398 GFYIITVQ-SFTLGGKLVT*SFLIGIPSSVFVGTLLIPYGA 279
           G Y++  Q +F + G  VT SFLI   +S F G     + A
Sbjct: 44  GVYVLAGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFAA 84


>AE014296-3741|AAF51880.1|  604|Drosophila melanogaster CG11128-PB,
           isoform B protein.
          Length = 604

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 398 GFYIITVQ-SFTLGGKLVT*SFLIGIPSSVFVGTLLIPYGA 279
           G Y++  Q +F + G  VT SFLI   +S F G     + A
Sbjct: 44  GVYVLAGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFAA 84


>AE014296-3740|AAF51881.1|  604|Drosophila melanogaster CG11128-PA,
           isoform A protein.
          Length = 604

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 398 GFYIITVQ-SFTLGGKLVT*SFLIGIPSSVFVGTLLIPYGA 279
           G Y++  Q +F + G  VT SFLI   +S F G     + A
Sbjct: 44  GVYVLAGQVAFNIAGPAVTISFLIAAIASAFAGICYAEFAA 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,171,012
Number of Sequences: 53049
Number of extensions: 428522
Number of successful extensions: 722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)