Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e13
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   2.5  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   3.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 8   NLNVHPYIPIEILICVEIEKIFS 76
           NLNV+P     + +C EI + +S
Sbjct: 642 NLNVYPEFQENVQLCSEISESYS 664


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = -2

Query: 222 ISLVVFLVVVHDGILLIQKAVMFKISFGIIKC 127
           +S+ VFL+ + + +   +K  +  + +G+  C
Sbjct: 253 LSMTVFLMTIRESLPPTEKTPLISLYYGVSIC 284


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 156 FKISFGIIKCTCYIQRKTTS 97
           F+ +F  I C C+ +R+T +
Sbjct: 69  FRFAFKSIICKCFCKRRTNT 88


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 156 FKISFGIIKCTCYIQRKTTS 97
           F+ +F  I C C+ +R+T +
Sbjct: 517 FRFAFKSIICKCFCKRRTNT 536


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,605
Number of Sequences: 438
Number of extensions: 3332
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)