Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e12
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +3

Query: 111 KRPMSAYMLWLNSAREQIKSE 173
           K+P++A+ML++   R ++ +E
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAE 500


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +3

Query: 111 KRPMSAYMLWLNSAREQIKSE 173
           K+P++A+ML++   R ++ +E
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAE 392


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 283 YCSLALAAFCSHSVLSFIDFQISPPFLAISVT 188
           YCSLA+   C   +       I+ P L I V+
Sbjct: 415 YCSLAIFVLCELLIEGTTSILINVPSLIIHVS 446


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 83  PDGKNFEIIFELVHN 39
           P G NFEI FE  +N
Sbjct: 319 PAGSNFEIGFENYYN 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,842
Number of Sequences: 336
Number of extensions: 2717
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)