Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e11
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 38 0.001
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 32 0.061
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 32 0.081
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 30 0.33
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 29 0.43
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 29 0.57
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 28 1.3
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 26 4.0
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 26 4.0
SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po... 26 4.0
SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual 26 5.3
SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces ... 26 5.3
SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.3
SPAC1783.06c |atg12|apg12|autophagy associated protein Atg12|Sch... 25 7.0
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 25 7.0
SPBC119.16c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.3
SPAC1D4.08 |pis1||CDP-diacylglycerol--inositol 3-phosphatidyltra... 25 9.3
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 25 9.3
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 37.9 bits (84), Expect = 0.001
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Frame = +1
Query: 121 TQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSD 300
T+S++ + E E+ I EN S +++ ++EV K+ + +
Sbjct: 464 TKSTVESSANEEEAEPNEI-IEENAVKSLLNQEGPATNEEVEKNNANSENANGLTDEKII 522
Query: 301 LYPTSSVAMMNQATQSDKPIEEQLEDIKIAAN-----KITQAIQSEMANLLTYALNTYEK 465
P + + + DKP EDI ++++ ++ E A+ LN +K
Sbjct: 523 EAPLDT----KENSDDDKPSPAAAEDIGTNGAIEEIPQVSEVLEPEKAHTTNLQLNALDK 578
Query: 466 EHEDNNLRKKRSTETPVDSSQLIMRLLKHIKATNEFQNIAID 591
E + N K+S+E D + + + + I++++EF+++ ID
Sbjct: 579 EEDLNITTVKQSSEPTADDNLIPNKEAEIIQSSDEFESVNID 620
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 32.3 bits (70), Expect = 0.061
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 241 VTKDEGKQDWMDFFLGPNSDLYPTS-SVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQ 417
++ D + +D + NSD +P S V N + KPI E LED+ + I Q +
Sbjct: 143 ISIDRNNRIKLDNSISSNSDNFPPSPKVDTSNTVSPGSKPISEDLEDLNL--QSIVQTFE 200
Query: 418 SEMANLLTYA 447
+ +YA
Sbjct: 201 DLPEGIQSYA 210
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 31.9 bits (69), Expect = 0.081
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Frame = +1
Query: 121 TQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSD 300
T+SS AD +EE ++ ++S+ +E +D K+ K++ + N
Sbjct: 27 TESSFSDADSSEEEFVEEKEASQ-VQSTKSKIATSESEDVTLKNIAKKNKRE----RNDK 81
Query: 301 LYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMA--NLLTYALNTYEKEHE 474
L P S N++ +KP++ E +++ N++ ++ S + +YA T +K+H
Sbjct: 82 LIPQQS----NESEAIEKPVQSTTE-VELKTNELAESNSSVAVEGDENSYA-ETPKKKH- 134
Query: 475 DNNLRKKRSTETPVDSSQLIMRLLKHIKATNEFQNIAIDKMMTAQQIADKFGI 633
+ +RK+R ++P+DSS L K+ T E K + Q I D+ I
Sbjct: 135 -SLIRKRR--KSPLDSSSAQKVLKKNKLNTLEQAQQNWSKYIKEQDIQDELRI 184
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 29.9 bits (64), Expect = 0.33
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 273 HPILFSFIFGYLIIEFCL 220
HPI FSF+FG+L + +C+
Sbjct: 257 HPIGFSFLFGFLSVAWCM 274
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 29.5 bits (63), Expect = 0.43
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 196 ESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLY--PTSSVAMMNQATQSDKPIEEQ 369
E IH + E DE+ ++ + + G +++ P+SS +T D+P EE+
Sbjct: 200 EDKEIHSEENETKDEIKSEKKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQPSEEE 259
Query: 370 LEDIKIAANKITQAIQSEMANLLTYALN 453
+ I KI I+ + + ++N
Sbjct: 260 EKTSDIQDRKIKTPIKPSLLGKIRSSVN 287
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 29.1 bits (62), Expect = 0.57
Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 331 NQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYA-LNTYEKEHEDNNLRKKRSTE 507
NQ + +PI + + +++ + + I ++AN + + + ++ + ++ KK TE
Sbjct: 655 NQNVELTEPILSRFDILQVVKDTVNPEIDEQLANFVVSSHIRSHPAFDPNMDVLKKVPTE 714
Query: 508 TPVDSSQLIMRLLK 549
T +D+ + LL+
Sbjct: 715 TGIDAKPIPQDLLR 728
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 264 LFSFIFGYLIIEFCLVFMNIRAFYIFSNWKFFN 166
L++ +G + ++ C + N++ + FS W FFN
Sbjct: 613 LYNPFYGLVALKCCTLQHNLKKSFQFSLWDFFN 645
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 26.2 bits (55), Expect = 4.0
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1
Query: 175 LPITENIESSNIHENQTEFDDEVTKDEGKQD 267
LP+TE+++ +N+ E+D + +D + D
Sbjct: 428 LPVTESVDEEVSTDNEVEYDSDDERDRLEAD 458
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 26.2 bits (55), Expect = 4.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 NSDLYPTSSVAMMNQATQSDK-PIEEQLEDIKIAANKITQAIQSEMANLLTYALNTYEKE 468
N D +P++S + QA +DK P+ E +++K + S + L T ++ T +
Sbjct: 350 NDDSFPSASSSPQRQAYMTDKMPLREIDVGSSQSSSKTARLNSSPKSTLKTSSVKT-RRS 408
Query: 469 HEDNNLRK 492
H + RK
Sbjct: 409 HSAQSSRK 416
>SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 399
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 273 GFFLGTKL*FISYVFSGNDEPSY 341
G+F GTK F + +F N++P Y
Sbjct: 234 GYFRGTKNSFKATIFEKNEDPDY 256
>SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 450
Score = 25.8 bits (54), Expect = 5.3
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +1
Query: 106 QELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFL 285
+E+ +T S D T S +ELP E ESS+ D + + + MD
Sbjct: 368 KEIDETTESKATHDSSETSSSKELPKEEEKESSSFDLQPLSAQDLLFSGFAEDEIMDEEF 427
Query: 286 GPNSD 300
G + D
Sbjct: 428 GYDDD 432
>SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 131 ELCVCCNSWRVALVT*QQSNSRVLNMI 51
+ C+CCN W T Q +N+ NMI
Sbjct: 24 QFCLCCNPWYAGADTRQLANA--FNMI 48
>SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 116
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 292 NSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQ 417
+ DL+ S + Q Q+ +E ++ DI +A K +AIQ
Sbjct: 5 DDDLFSEKSTSSDTQQVQNILELEAKIPDILSSAGKCIEAIQ 46
>SPAC1783.06c |atg12|apg12|autophagy associated protein
Atg12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 132
Score = 25.4 bits (53), Expect = 7.0
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 358 IEEQLEDIKIAANKITQA--IQSEMANLLTYALNTY-EKEHEDNNLRKKRSTETPVDSSQ 528
+++Q + ++A + +Q I++++ ++ T +NTY EKE+ NLR K TP
Sbjct: 5 VDQQELEKRLATEEDSQNEDIENQLPSIETI-INTYREKENRRVNLRFKAIGRTP----- 58
Query: 529 LIMRLLKHIKATNEFQNI 582
L+ + + I A+ F+ +
Sbjct: 59 LLRKTVFSINASQRFEKV 76
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 7.0
Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 1/127 (0%)
Frame = +1
Query: 205 NIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKPIE-EQLEDI 381
NIH N + +FF G + + MM+ T P
Sbjct: 395 NIHSNPVPISGQQPSSPASNSNANFFFGSSPQSMSSEQTDMMSPITSPLAPFSGVTRRAA 454
Query: 382 KIAANKITQAIQSEMANLLTYALNTYEKEHEDNNLRKKRSTETPVDSSQLIMRLLKHIKA 561
+ AN + S++ L T L+ N+ R R + Q + ++ + +A
Sbjct: 455 RTRANSASSVFNSQLQPLQTDLLSPLPSPTSSNS-RLPRVRSACTLNVQELSKIPPYYEA 513
Query: 562 TNEFQNI 582
+ F N+
Sbjct: 514 HSAFTNV 520
>SPBC119.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 295 SDLYPTSSVAMMNQATQSDKPIEE 366
SDL+P SV + N +T D +EE
Sbjct: 239 SDLHPFYSVGLANTSTLLDNDLEE 262
>SPAC1D4.08 |pis1||CDP-diacylglycerol--inositol
3-phosphatidyltransferase Pis1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 251
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = -2
Query: 420 ALNCLCYFICCYFNVFELFFDWFIGLCSLVHHCH 319
A +CL F+C + + + F + L H+ H
Sbjct: 94 ATSCLLCFLCAAYPKYAIIFQLLVSLDLASHYMH 127
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 190 NIESSNIHENQTEFD 234
NI SS I+ NQTEF+
Sbjct: 69 NISSSKINNNQTEFE 83
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,328,136
Number of Sequences: 5004
Number of extensions: 43419
Number of successful extensions: 141
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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