Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e11
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0047 - 429838-429960,430413-430508,430589-430596,431088-43... 33 0.15
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 33 0.19
12_01_0723 - 6360652-6360753,6360898-6361239 31 0.59
05_04_0287 + 19837262-19837552,19837672-19837971,19838120-19838212 30 1.8
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 29 2.4
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 29 3.1
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 29 4.1
09_02_0578 + 10869627-10869702,10870489-10870555,10870813-108709... 28 5.5
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 28 7.2
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 28 7.2
>06_01_0047 -
429838-429960,430413-430508,430589-430596,431088-431141,
431226-431274,431368-431466,431560-431639,431926-431989,
432082-432255,432342-432965,433046-433189,433262-433372,
433442-433498,433664-433798
Length = 605
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/85 (23%), Positives = 41/85 (48%)
Frame = +1
Query: 370 LEDIKIAANKITQAIQSEMANLLTYALNTYEKEHEDNNLRKKRSTETPVDSSQLIMRLLK 549
L D+ ++ + + +E+ L L+ K ED+N++ KRS +D+ +I ++L+
Sbjct: 63 LNDMDVSQPHVNEISTNELLKTLKRKLSK-SKRSEDDNIKMKRSESIELDNDVMINQVLR 121
Query: 550 HIKATNEFQNIAIDKMMTAQQIADK 624
I ++ N K+ I D+
Sbjct: 122 DIIQMDQIINNLKKKLNIHHNIGDQ 146
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 292 NSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNTYEKEH 471
+SD S + +Q++++D I + ED K + ++I++ E+ L LN +K
Sbjct: 62 DSDEIFVDSTSSYSQSSENDDVISDS-EDSKTSCDEISK---EELLRSLKLKLNK-KKVS 116
Query: 472 EDNNLRKKRSTETPVD-SSQLIMRLLK 549
D NL++KRS T VD +QL LL+
Sbjct: 117 VDCNLKRKRSETTEVDFKNQLDSALLE 143
>12_01_0723 - 6360652-6360753,6360898-6361239
Length = 147
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 490 KKRSTETPVDSSQLIMRLLKHIKATNEFQNIAIDKMMTAQQIADKF 627
K S++ + SS+ + R LK+++ IA+D + TA+ +AD+F
Sbjct: 47 KVNSSKDNMKSSRHVKRRLKYVRKQKNSGVIALDYVQTARNLADQF 92
>05_04_0287 + 19837262-19837552,19837672-19837971,19838120-19838212
Length = 227
Score = 29.9 bits (64), Expect = 1.8
Identities = 29/130 (22%), Positives = 57/130 (43%)
Frame = +1
Query: 100 TLQELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDF 279
TL+E + + ++E E +P TE ++ + H N + DEG +
Sbjct: 45 TLEEEELYMMNNSISEEAAKTFYELIPSTEKLKVLHFHNN-------MMGDEGAMFVAEM 97
Query: 280 FLGPNSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNTY 459
L + +L ++A++N + K + Q+E +++A NKI +A LT +
Sbjct: 98 ILLGDLNLENKGTLAIVN----TRKQLTPQIEVLEMARNKINAKEAQALAECLTTLQSLK 153
Query: 460 EKEHEDNNLR 489
+ +N L+
Sbjct: 154 KLTLAENGLK 163
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/103 (20%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +1
Query: 85 HVTNATLQELQQTQSSIIFADEETTVSIEEL----PITENIESSNIHENQT--EFDDEVT 246
HV +++ +++ +S+++ ++ VS +++ + I+ + ++N + +DE+
Sbjct: 382 HVLDSSAPNIEEHRSTVLQVLQQIGVSQDKINSMIEVWNKIDIVDNNDNDVTDDIEDEIF 441
Query: 247 KDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKPIEEQLE 375
EG++D + N SS ++ T S+ EE LE
Sbjct: 442 LTEGEEDKEEELFSENDVPAEESSFESLDDGTDSEYLSEENLE 484
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +1
Query: 142 ADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQD---WMDFFLGPNSDLYPT 312
+DEE ++E E+ E + H + +FDDE ++EG + DFF +D
Sbjct: 212 SDEEEEEDLDEDEDNEDEEDDDEHLDLEDFDDEEEEEEGAVGDIMYKDFF--EEADDQKV 269
Query: 313 SSVAMMNQATQSDKPIEEQLED 378
+ D+P E +++D
Sbjct: 270 RKKGGSKKVQFKDEPDEPEVDD 291
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 97 ATLQELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMD 276
+++ + + S+I DE V EEL + SS+ EN+ D + +E + WM
Sbjct: 757 SSISRMIRMGSTIHEGDESEKVKAEELRLPAVATSSSPLENKLRKDIDTLLEENLEFWMK 816
Query: 277 F 279
F
Sbjct: 817 F 817
>09_02_0578 +
10869627-10869702,10870489-10870555,10870813-10870963,
10871043-10871111,10871992-10872030,10872113-10872186,
10872281-10872347,10872902-10873075,10873169-10873852
Length = 466
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 349 DKPIEEQLEDIKIAANKITQAIQSEMANLLTYALN 453
D+ +E+Q ED+K ++ + + S+M ++ A N
Sbjct: 417 DQTVEQQPEDLKTQEQQLNEVVDSQMEEIVEIAKN 451
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 85 HVTNATLQELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQ 264
+ +A E +++ + F DEE V EE+ E IE E + E D++V ++ +
Sbjct: 415 NAASANSVEPDKSEECLEFDDEEEEVEEEEIEY-EEIEEEIEEEEEVEEDEDVVEEVEEV 473
Query: 265 D 267
D
Sbjct: 474 D 474
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 298 DLYPTSSVAMMNQATQSDKPIEEQLEDIKI-AANKITQAIQSEMANLLTYALNTYEKEHE 474
D+ P M+ + + +E QL++ K A K QA + ++ LT L +H+
Sbjct: 303 DVKPDPKNEMVRDLIRQTREMEAQLKERKEWAQQKAIQAAR-KLGTDLT-ELRVLRMQHD 360
Query: 475 DNNLRKKRSTETPVDSSQLIMRLLKHIK 558
+N RKK E ++ + + +L +K
Sbjct: 361 ENQRRKKDKQEMEDETMKRLTQLENELK 388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,462,128
Number of Sequences: 37544
Number of extensions: 225128
Number of successful extensions: 514
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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