Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e11
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 39 0.003
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 31 0.80
SB_29256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_9641| Best HMM Match : MAT1 (HMM E-Value=0.47) 31 0.80
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_40742| Best HMM Match : Pox_A32 (HMM E-Value=0.042) 31 1.1
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 31 1.1
SB_16904| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 30 1.8
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_52112| Best HMM Match : PH (HMM E-Value=2.4e-14) 29 2.4
SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7) 29 2.4
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_12045| Best HMM Match : bZIP_1 (HMM E-Value=4.2) 29 4.2
SB_56370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_18705| Best HMM Match : DUF718 (HMM E-Value=2.3) 28 5.6
SB_2513| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_46713| Best HMM Match : GrpE (HMM E-Value=1.7) 28 7.4
SB_12718| Best HMM Match : rve (HMM E-Value=0.0031) 28 7.4
SB_14139| Best HMM Match : E3_binding (HMM E-Value=2.4) 28 7.4
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.8
SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 27 9.8
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +1
Query: 349 DKPIEEQLEDIKIAAN---KITQAIQSEMANLLTYALNTYEKEHEDNNLRKKRSTETPVD 519
++ I+ E K AN + + I+S NL + A N Y + + N+++ K TET +
Sbjct: 935 NREIKIMAEQWKAEANNSERQRKRIESSYLNLQSQAKNLYGVDSKLNDIQSK-FTETEKE 993
Query: 520 SSQLIMRLLKHIKATNEFQNIAIDKMMTAQQIADKFGIE 636
SQL+ ++ K K+ EF+ + + + Q+AD +E
Sbjct: 994 KSQLLDKVKKLEKSEKEFKQLEYNITVLQNQLADMESVE 1032
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 31.1 bits (67), Expect = 0.80
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +1
Query: 106 QELQQTQSSIIFADEETTVSIEELPITENIES-SNIHENQTEFDDEVTKDEGKQDWMDFF 282
Q++++ + D+E +IE P ++IES S +ENQ +D+ + + W D
Sbjct: 841 QDVEKMKELETMKDDEKMKNIEGKPYEDDIESFSPPNENQ-RVEDKTSAVNAYEQWKDKE 899
Query: 283 LGPNSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSE 423
+ L + ++A ++ +K I+EQ+ I A+ + A E
Sbjct: 900 EDVRNQL--SKALAELHSLRNDNKEIKEQMRTI-AASTAVPSASHQE 943
>SB_29256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 481 NLRKKRSTETPVDSSQLIMRLLKHIKATNEFQNIAIDKMMTAQQIADKF 627
N RK RS +P+ Q ++++ +H+ N + + + TAQ AD +
Sbjct: 22 NRRKARSGTSPIMLGQTLIQIKRHLAIINLLTALLVAPLHTAQLFADMY 70
>SB_9641| Best HMM Match : MAT1 (HMM E-Value=0.47)
Length = 642
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 65 LCYSIAVMLLTPLSKNYSKHRVQLYLPTKKQQYQLKNFQLLKI*KALIFMKTKQNSMMR 241
+ Y V ++ PL SKH+V + + LK QLL + K + K N ++R
Sbjct: 505 ILYYDEVEVVNPLGSKTSKHKVGILIQNSNSNSILKAIQLLAVAKRPVIQKYGCNEILR 563
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Frame = +1
Query: 115 QQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPN 294
QQ Q++ +A E+T + + T+ +S ++Q D + + Q P
Sbjct: 557 QQAQAAQAYASEQTQAT--QADATQQTQSYASQQSQASQDYPSQQTQATQPQEQ----PA 610
Query: 295 SDLY--PTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNTYEKE 468
+ Y PT+ Q TQ+ KP E Q N+ Q Q E N A NTY +
Sbjct: 611 AQQYQAPTADQTQAYQDTQTQKPQEAQPTQAAQQDNQTQQPAQGESQN----AYNTYASQ 666
Query: 469 H 471
+
Sbjct: 667 N 667
>SB_40742| Best HMM Match : Pox_A32 (HMM E-Value=0.042)
Length = 579
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Frame = +1
Query: 106 QELQQTQSSIIFAD-EETTVS-IE-ELPITENIESSNIHENQTEFDDEVTKDEGKQDWMD 276
+ LQ T +F EE +S +E E + + I+S N+ + +++ D+ T + K++ ++
Sbjct: 92 ETLQDTNRYDVFKTYEELYLSKVEREDRLEQGIQSENMRKLRSKAGDKATSN-AKENALN 150
Query: 277 FFLGPNSDLYPTSSVAMMNQATQSDKPIEE-QLEDIKIAANKITQAIQSEMANLLTYALN 453
G + P +M+ + + E QL +I +A K+ Q + A L+Y +
Sbjct: 151 AAHGAKYTI-PLDHSLLMDHGVLYPRALSEAQLFEITLA--KVDQVVVGSNATKLSYGIK 207
Query: 454 TYEKEHE---DNNLRK 492
E E+E D+NL +
Sbjct: 208 NLELEYESLRDDNLAR 223
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/104 (21%), Positives = 48/104 (46%)
Frame = +1
Query: 94 NATLQELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWM 273
N T +E +QT+ +EE + EE TE E E + E +E +++G+++ +
Sbjct: 69 NNTEEEEEQTEEEEEQTEEEEEQTEEEEEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEVV 128
Query: 274 DFFLGPNSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKIT 405
G +S ++ N++ +S++ E ++ + +T
Sbjct: 129 TDERGISSSKDESNESDESNESDESNESDESNGSELAVTDMLVT 172
>SB_16904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 30.7 bits (66), Expect = 1.1
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Frame = +1
Query: 109 ELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLG 288
+LQ T+ + A E+ E+L + + + + + E D K E K LG
Sbjct: 798 QLQYTKGELKAALEKQKKEYEKLKLELDQSQATVFNLRREVRDYKPKLEEK-----LHLG 852
Query: 289 PNSDLYPTSSVAMMNQATQSDKPIEEQL-----------EDIKIAANKITQAIQSEMANL 435
D T + +MN TQ K + L E+ A K+TQ++++ + NL
Sbjct: 853 AEIDKL-TKELVIMNIETQELKKFADSLTGTYTGKIKALEEKYAAQKKVTQSLEAHILNL 911
Query: 436 LTYALNTYEKEHED--NNLRKKRSTETPVDSSQL 531
+T K H+ +LR + TET S L
Sbjct: 912 KLALQDTTNKRHQKAAAHLRVEAGTETQGASDNL 945
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/80 (27%), Positives = 43/80 (53%)
Frame = +1
Query: 214 ENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAA 393
ENQ + DD+ +KD+ K D D + D +P + +++ +K + ++ +K AA
Sbjct: 1225 ENQDKDDDDDSKDDDKDDDKDEDADEDED-HPRKNKPRVSKIKDKNKVL---MDVLKSAA 1280
Query: 394 NKITQAIQSEMANLLTYALN 453
NK + +++ +L +ALN
Sbjct: 1281 NKNCRP-KNDKTVMLPWALN 1299
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 190 NIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKPIEEQ 369
+I ++ + T+ E+T Q W+ + +GP + + S + T ++K E
Sbjct: 562 SITEKSVPKEDTQGPREITL----QLWLFYRIGPKTGRWQEYSRRKSPRRTSAEKEPSEG 617
Query: 370 LEDIKIAANKI 402
EDIK+ A K+
Sbjct: 618 KEDIKLLARKV 628
>SB_52112| Best HMM Match : PH (HMM E-Value=2.4e-14)
Length = 356
Score = 29.5 bits (63), Expect = 2.4
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +1
Query: 142 ADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSV 321
A +E ++ P+ E E + E ++ DE TK+ +QD P + TSS
Sbjct: 129 AHKEDATNLTFAPVLEEDEEKDEGELDNKYGDEKTKETEEQDNKGVDKPPPAPHLTTSSE 188
Query: 322 AMMNQATQSDKPIE-EQLEDIKIAANKITQAIQSEMANLLTYALNTYEKEHEDNNLRKKR 498
+ + IE E+LED A T +SE ++ N + + R +R
Sbjct: 189 SHEKFGEDMYEAIESEELEDDGFA----TDEFESESSD------NDSQTSSSKTSPRTQR 238
Query: 499 STETPVDSSQLIMRLLKHIKATNE 570
T+ S L+ L K KA N+
Sbjct: 239 KTK---KKSHLLKWLKKKTKAKNQ 259
>SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7)
Length = 828
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 100 TLQELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQ--DWM 273
++ E + S ++ + ++ L + + ++ + E DDE + + ++ DW+
Sbjct: 368 SVDETSKDAFSRFVTTDQCPMFVKALVVKASPQAEGARKQAYESDDEDEQADAEEQPDWV 427
Query: 274 DFFLGPNSDLYPTSSVAMMNQATQSDKPIEE 366
D + GPN +Y + +K IEE
Sbjct: 428 DVYAGPN-QMYEGVEEFQYDDGVWLEKQIEE 457
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 29.1 bits (62), Expect = 3.2
Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 4/159 (2%)
Frame = +1
Query: 115 QQTQSSIIFADEETTVSIEEL-PITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGP 291
Q T +F ++ +I+ L ++IE + ++ E DD KDE K D + L
Sbjct: 89 QDTNPESVFMAKDRVSAIQSLCEYEDSIEDGEVKDDVNEKDDSNNKDETK-DSNEGSLTI 147
Query: 292 NSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNTYEKEH 471
++DL ++ DK ++ ++ K +K + E ++ L+T +K
Sbjct: 148 SNDLNSEKKDKKKHKKHSKDKKKKKHKKEKKREKDKHKHKQEKESSDDKPDELSTPKKIS 207
Query: 472 EDNNLR---KKRSTETPVDSSQLIMRLLKHIKATNEFQN 579
E + + ++R P+ S R K ++ + N
Sbjct: 208 EKGSPKGDGRERKQSHPLSSRDQTTRQSKRSRSRSATLN 246
>SB_12045| Best HMM Match : bZIP_1 (HMM E-Value=4.2)
Length = 220
Score = 28.7 bits (61), Expect = 4.2
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 14/166 (8%)
Frame = +1
Query: 142 ADEETTVSIEELPITENIESSNIHENQT-------EFDDEVTKDEGKQDWMDFFLG-PNS 297
A E+ T S + + + SSN EN+T +++D + ++EG + L PN+
Sbjct: 59 ASEDQTCSSTKPERQKRVASSNFQENRTKKSKVILDYEDYI-ENEGDVPFSGCHLNFPNN 117
Query: 298 -DLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNTYEKEHE 474
DL + + + Q T+ D LE+ ++A+ + + + L EK+ E
Sbjct: 118 KDLVQPENHSDLIQRTERD------LEEARLASQTFEKECSNFDSMRLECLRKVKEKQEE 171
Query: 475 DNNLRKK----RSTETPVDSSQL-IMRLLKHIKATNEFQNIAIDKM 597
N LR + R +D S++ + K +K E+ +D +
Sbjct: 172 MNRLRSEIKELRKNALELDRSKMKVFENWKQVKQLVEYLGTKLDSL 217
>SB_56370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 184 TENIESSNIHENQTEFDDEVTKDEGKQDWMD 276
+ENI+S N ++N + D+++ D+ Q W D
Sbjct: 100 SENIDSKNNNDNDDDDDNDIEGDDPWQLWKD 130
>SB_18705| Best HMM Match : DUF718 (HMM E-Value=2.3)
Length = 650
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +1
Query: 430 NLLTYALNTYEKEHEDNNLRKKRSTETPVDSSQLIMRLLKH-----IKATNEFQNIAIDK 594
NL + + Y KEH+ K+R + Q++ +L KH +K FQN+ K
Sbjct: 532 NLREHQVFQYLKEHQVFQNLKERQVLQNLKEHQVLQKLTKHQVFQYLKEHQVFQNLREYK 591
Query: 595 MMTAQQIA 618
+ QQ++
Sbjct: 592 YLRNQQVS 599
>SB_2513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 211 HENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKP--IEEQLEDIK 384
H+NQ + E ++ + D + P L+P V + + T+ KP I+E+LED
Sbjct: 510 HDNQEVIGRLAYRQEMQKQYHDRHVKPLPILHPGQPVTIQDPTTRKWKPAVIKEKLEDAP 569
Query: 385 IA 390
++
Sbjct: 570 LS 571
>SB_46713| Best HMM Match : GrpE (HMM E-Value=1.7)
Length = 420
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 261 FSFIFGYLIIEFCLVFMNIRAFYIFSNWKFFN*YC-CFFV 145
+ F+ G +I F L + +IF++WK + C FF+
Sbjct: 44 WKFLLGIIITHFSLAIVTEIIIFIFADWKSLSIACQAFFI 83
>SB_12718| Best HMM Match : rve (HMM E-Value=0.0031)
Length = 1667
Score = 27.9 bits (59), Expect = 7.4
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Frame = +1
Query: 106 QELQQTQSSIIFAD-EETTVS-IE-ELPITENIESSNIHENQTEFDDEVTKDEGKQDWMD 276
+ LQ T +F EE +S +E E + + I+S N+ + +++ D+ T + K++ ++
Sbjct: 439 ETLQDTNRYDVFKTYEELYLSKVEREDRLEQGIKSENMRKLRSKAGDKTTSN-AKENALN 497
Query: 277 FFLGPNSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNT 456
G + P + + + + E L KI + Q + A L+Y + T
Sbjct: 498 AAHGAKYTI-PLDHSLLTDHGVLYPRALSEALI-FKITLATVDQVVVGSDATKLSYGIKT 555
Query: 457 YEKEHE---DNNLRK 492
E E+E D+NL +
Sbjct: 556 LELEYESLRDDNLAR 570
>SB_14139| Best HMM Match : E3_binding (HMM E-Value=2.4)
Length = 301
Score = 27.9 bits (59), Expect = 7.4
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Frame = +1
Query: 106 QELQQTQSSIIFAD-EETTVS-IE-ELPITENIESSNIHENQTEFDDEVTKDEGKQDWMD 276
+ LQ T +F EE +S +E E + + I+S N+ + +++ D+ T + K++ ++
Sbjct: 69 ETLQDTNRYDVFKTYEELYLSKVEREDRLEQGIKSENMRKLRSKAGDKTTSN-AKENALN 127
Query: 277 FFLGPNSDLYPTSSVAMMNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNT 456
G + P + + + + E L KI + Q + A L+Y + T
Sbjct: 128 AAHGAKYTI-PLDHSLLTDHGVLYPRALSEALI-FKITLATVDQVVVGSDATKLSYGIKT 185
Query: 457 YEKEHE---DNNLRK 492
E E+E D+NL +
Sbjct: 186 LELEYESLRDDNLAR 200
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 432 ISHFALNCLCYFICCYFNV 376
+ F CLC+ + CYFN+
Sbjct: 754 VGSFTGTCLCFVLPCYFNI 772
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 27.5 bits (58), Expect = 9.8
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Frame = +1
Query: 169 EELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQS 348
EE+ ++ + + +N++E DD+ K++ K D D G D +A +
Sbjct: 570 EEIGDKKSDKEESAEKNESEKDDDDGKEDDKGDKDDEDGGGEKDADEGEKMAEKEVDKEG 629
Query: 349 DKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNTYEKEH--EDNNLRKKRSTETPVDS 522
DK E+ +D + K A + E + A + Y++ + ED L+ + E
Sbjct: 630 DKESEKSEKDGEKGDEKKDDAKKQEDEDAEEGADDGYDEYYYDEDEPLQCEVCKEEFTSE 689
Query: 523 SQLIMRLLKH 552
++L L H
Sbjct: 690 TKLRKHLSSH 699
>SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2142
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 106 QELQQTQSSIIFADEETTVSIEELPITENIESSNIH-ENQTEFDDEVTKDEGKQDWMDFF 282
+EL++ ++ + DE+ + E +NIESS++ ++ +F D K+D +D
Sbjct: 511 RELKREENISLEVDEDALLMSESEDGGDNIESSSLSGTSEVDFSDVPLGGSHKEDILDEI 570
Query: 283 LGPNSD 300
L + D
Sbjct: 571 LSLHPD 576
>SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 872
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 220 QTEFDDEVTKDEGKQDWMDFFLGPN 294
+++ +DE E + DW+D + GPN
Sbjct: 179 ESDGEDEPADAEEQPDWVDIYAGPN 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,375,822
Number of Sequences: 59808
Number of extensions: 291468
Number of successful extensions: 769
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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