Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e11
(643 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32830.1 68414.m04046 hypothetical protein similar to At2g049... 31 0.65
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 31 0.86
At3g30450.1 68416.m03852 hypothetical protein similar to At2g049... 30 1.1
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1... 30 1.5
At3g24010.1 68416.m03016 PHD finger family protein contains Pfam... 30 1.5
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 30 1.5
At4g03590.1 68417.m00494 hypothetical protein 29 2.6
At3g18310.1 68416.m02330 expressed protein 29 2.6
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 28 4.6
At2g21370.1 68415.m02543 xylulose kinase, putative similar to xy... 28 4.6
At2g07190.1 68415.m00824 hypothetical protein 28 4.6
At1g56100.1 68414.m06442 pectinesterase inhibitor domain-contain... 28 4.6
At5g34895.1 68418.m04113 hypothetical protein similar to At2g049... 28 6.1
At4g15970.1 68417.m02424 expressed protein similar to GI:2827651... 28 6.1
At2g39440.1 68415.m04841 expressed protein 28 6.1
At1g31660.1 68414.m03887 bystin family contains Pfam profile: PF... 27 8.0
At1g10130.1 68414.m01142 calcium-transporting ATPase 3, endoplas... 27 8.0
>At1g32830.1 68414.m04046 hypothetical protein similar to At2g04970,
At2g15200, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 707
Score = 31.1 bits (67), Expect = 0.65
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 145 DEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQD 267
+EE V + T N+E + EN + D+E+ ++EGK++
Sbjct: 417 EEEEKVEYRDHHSTCNVEETEKQENPKQCDEEMEREEGKEE 457
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 145 DEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQD 267
+EE V + T N+E + EN + D+E+ ++EGK++
Sbjct: 396 EEEEKVEYRDHHSTCNVEETEKQENPKQGDEEMEREEGKEE 436
>At3g30450.1 68416.m03852 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 800
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/88 (19%), Positives = 40/88 (45%)
Frame = +1
Query: 145 DEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVA 324
+E+ V + T N+E + EN + D+E+ ++EGK++ ++ N + +
Sbjct: 477 EEQEKVEYRDHHSTCNVEETEKQENPKQGDEEMEREEGKEEKVEKHDEYNDAADQEAYIN 536
Query: 325 MMNQATQSDKPIEEQLEDIKIAANKITQ 408
+ + P E++ + K N + +
Sbjct: 537 LSDDEDNDTAPTEKESQQKKEETNVLKE 564
>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
family protein similar to 13S condensin XCAP-D2 subunit
[Xenopus laevis] GI:3764087; contains Pfam profile
PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
Length = 1439
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 106 QELQQTQSSIIFADEETTVSIEELPITENIESSNIHE-NQTEFDDEVTKDEGKQDWMDFF 282
+E +T S+ + +EE E + S I + + E D + + E +++ D
Sbjct: 1250 REKTKTMESLAVLSKVKEEPVEEYDEGEGVSDSEIVDPSMEESGDNLVETESEEEPSDSE 1309
Query: 283 LGPNSDLYPTSSVAMMNQATQSDKPIEEQLED 378
P+S T+ +NQ T D IE + E+
Sbjct: 1310 EEPDSAQCGTAIPRYLNQKTSGDNLIETEPEE 1341
>At3g24010.1 68416.m03016 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 234
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/52 (28%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 346 SDKPIEEQLEDIKIAANKITQAIQS-EMANLLTYALNTYEKEHEDNNLRKKR 498
S++ ++EQ ++IA K+T A+Q+ ++ ++ L+ Y K+ D +RK++
Sbjct: 68 SEEALDEQKHSVRIADEKVTLAMQAYDLVDMHVQQLDQYMKK-SDEVIRKEK 118
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 106 QELQQTQSSIIFADEETTVSIEELPITENIESSNIHENQTEFDDEVTKDEGKQD 267
+E +Q + +E+ V ++ T N+E + EN + D+E+ ++EGK++
Sbjct: 559 EEEKQEEEGKEEEEEKICVEYKDHHSTCNVEETEKQENPKQGDEEMEREEGKEE 612
>At4g03590.1 68417.m00494 hypothetical protein
Length = 246
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +1
Query: 181 ITENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKPI 360
+ E IES E++ DDE TK + D + P D++ M+ + ++ +
Sbjct: 19 LMEEIESVEADESEDTSDDEETKTNVHEANFDMLMAPEWDVHSFEEKTMIKDSMEASSSV 78
>At3g18310.1 68416.m02330 expressed protein
Length = 873
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 564 SGLYVFQKPHNQLTAIDWCFCRS-FFSEIVV 475
S LYV++ PHN L + C C F E+++
Sbjct: 420 SSLYVWELPHNLLLPVGKCLCGDCLFREVMI 450
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 28.3 bits (60), Expect = 4.6
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Frame = +1
Query: 328 MNQATQSDKPIEEQLEDIKIAANKITQAIQSEMANLLTYALNTYEKEHEDNNLRKKRSTE 507
MN A + +K + ++ +I + IQ ++ L EKE E ++L + T
Sbjct: 1 MNSAEEENKSLSLKVSEISDVIQQGQTTIQELISELGEMKEKYKEKESEHSSLVELHKTH 60
Query: 508 TPVDSSQLIMRLLKHIKA--------TNEFQNIAIDKMMTAQQIAD 621
SSQ + L HI++ T N +K + +Q+IA+
Sbjct: 61 ERESSSQ-VKELEAHIESSEKLVADFTQSLNNAEEEKKLLSQKIAE 105
>At2g21370.1 68415.m02543 xylulose kinase, putative similar to
xylulose kinase (Xylulokinase) [Bacillus subtilis]
Swiss-Prot:P39211
Length = 478
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 245 PKMKENKIGWIFSWDQTLIYIL 310
P MKE +GW SW TL +L
Sbjct: 87 PFMKEESMGWASSWKATLFSLL 108
>At2g07190.1 68415.m00824 hypothetical protein
Length = 452
Score = 28.3 bits (60), Expect = 4.6
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Frame = +1
Query: 187 ENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKPIEE 366
+NIE N+ EN + D+VT+D + D M G + + V+ MN++ +
Sbjct: 235 DNIE--NVQENDVQGKDDVTEDGNEVDHMS---GVTEEGNEENHVSGMNRSKKKQSDHGA 289
Query: 367 QLEDIKIAANKITQAIQSEMANLLTYALNTYEKEHEDNNLRK-KRSTETPVDSSQLIMRL 543
+ K+ + T L +N++ K D++ K ++ ++ D + L+ L
Sbjct: 290 ETRKKKLLCQRATATTH----GALNDKMNSFLKALIDSSFEKFEKRLQSKEDDTSLVEGL 345
Query: 544 LKHIKATNE 570
+ + T +
Sbjct: 346 VSTSETTRK 354
>At1g56100.1 68414.m06442 pectinesterase inhibitor domain-containing
protein contains TIGRFAM TIGR01614: pectinesterase
inhibitor domain; contains weak hit to Pfam PF04043:
Plant invertase/pectin methylesterase inhibitor
Length = 232
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 463 KEHEDNNLRKKRSTETPVDSSQL--IMRLLKHIKATNE 570
K DN +RKK S ETP ++ L + LL + T +
Sbjct: 92 KSKSDNKIRKKPSVETPTEAKALKVVDNLLAELNQTTD 129
>At5g34895.1 68418.m04113 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At3g47270, At2g02200
Length = 490
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +1
Query: 184 TENIESSNIHENQTEFDDEVTKDEGKQDWMDFFLGPNSDLYPTSSVAMMNQATQSDKPIE 363
T N+E + EN + D+E+ ++EGK++ ++ N + V + + P E
Sbjct: 228 TCNVEETEKQENPKQGDEEMEREEGKEEKVEEHNEYNDAADQEAYVILSDNEDNGTAPTE 287
Query: 364 EQLEDIK 384
++ + K
Sbjct: 288 KESQPQK 294
>At4g15970.1 68417.m02424 expressed protein similar to GI:2827651,
GI:7527728, GI:4406788, GI:6063544, GI:10764853 from
[Arabidopsis thaliana]
Length = 367
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 255 FIFGYLIIEFCLVFMNIRAFYIFSNWKFFN 166
FI Y+I+ FCL NIR F+ F N
Sbjct: 337 FIKTYIILNFCLPMNNIRKFFFCFGSIFVN 366
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 400 ITQAIQSEMANL----LTYALNTYEKEHEDNNLRKKRSTETPVDSSQL 531
I +A+ SE NL AL +E+E ++ R+K + +TP SS+L
Sbjct: 219 IAEAVTSENKNLEERVKQSALTLHEREIRESEKREKETRKTPRSSSRL 266
>At1g31660.1 68414.m03887 bystin family contains Pfam profile:
PF05291 Bystin
Length = 442
Score = 27.5 bits (58), Expect = 8.0
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Frame = +1
Query: 106 QELQQTQSSIIFADEETTVSIEELPITENIESS-----NIHENQTEFDDEVTKDEGKQDW 270
+ ++ SS FA + EE I E E ENQ++FD + +E +
Sbjct: 64 ENAERNPSSAAFAVAGAATAGEEQKILEEEEDDIDDFDGTFENQSQFDKQEEINEDDEKL 123
Query: 271 MDFFLGPNSDLYPTSSVAMMNQATQSDKPI-EEQLEDIKI 387
+ FL N+ T + ++ + D + EE+ D K+
Sbjct: 124 FESFLNKNAPPQRTLTDIIIKKLKDKDADLAEEERPDPKM 163
>At1g10130.1 68414.m01142 calcium-transporting ATPase 3, endoplasmic
reticulum-type (ACA6) (ECA3) nearly identical to
SP|Q9SY55 Calcium-transporting ATPase 3, endoplasmic
reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana);
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 998
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 76 DCCHVTNATLQELQQTQSSIIFADEETTVSIEE---LPITENIESSNIHENQTEFDDEVT 246
DC TNA Q+ + +I+F+ + + + N +IH++ + DDE T
Sbjct: 189 DCTLTTNAVYQD----KKNILFSGTDVVAGRGRAVVIGVGSNTAMGSIHDSMLQTDDEAT 244
Query: 247 KDEGKQDWMDFFL 285
+ K D FL
Sbjct: 245 PLKKKLDEFGSFL 257
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,654,113
Number of Sequences: 28952
Number of extensions: 209073
Number of successful extensions: 624
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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