Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e10
(641 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 8e-29
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 76 2e-14
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 61 9e-10
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 58 6e-09
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 54 7e-08
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 54 1e-07
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 50 1e-06
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 49 4e-06
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 47 1e-05
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 45 5e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 44 8e-05
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 44 1e-04
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 44 1e-04
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 44 1e-04
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 43 2e-04
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 6e-04
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 41 7e-04
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 41 7e-04
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 40 0.002
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 38 0.007
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 38 0.009
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 36 0.021
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.021
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.028
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 35 0.049
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 35 0.049
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 35 0.065
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 34 0.11
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.26
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_9041| Best HMM Match : RRM_1 (HMM E-Value=1.4e-10) 31 0.80
SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 3.2
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 29 3.2
SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095) 29 3.2
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 29 4.2
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_54437| Best HMM Match : DUF226 (HMM E-Value=2) 27 9.8
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30) 27 9.8
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30) 27 9.8
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 124 bits (298), Expect = 8e-29
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +2
Query: 176 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHXXXXXX 352
E ++LYVGNLDP T+ +C++F +I V CK+I P + PY F+EF H
Sbjct: 365 EEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEA 424
Query: 353 XXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 532
M++R V+DK++KVNWAT+ + DT+NH HIFVGDL+ ++ +LR+ F PFGEI
Sbjct: 425 KFRMDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEI 484
Query: 533 S 535
S
Sbjct: 485 S 485
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 542 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
R+V+DP KSKG+ FVSFV++ DA AI M+
Sbjct: 543 RVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMD 575
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Frame = +2
Query: 278 KIIREPGNDP---YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKT---- 436
+++++P + + F+ F M+ + K++K NWA N +T
Sbjct: 543 RVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPLV 602
Query: 437 -DTSNHHH------IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 595
D H ++VG+L P+++ L++ F+ +G I ++ D KGYAF++
Sbjct: 603 WDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFIN 656
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG-YAFVSFVKKADAEAA 625
++VG+L P+ ++ F ++ C+++ P KG Y FV F ADA+ A
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSP---TDKGPYCFVEFETHADAQEA 424
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 191 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFL 319
T+YVGNL P V + L +F Q G + K+ + G YAF+
Sbjct: 616 TVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKG---YAFI 655
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 76.2 bits (179), Expect = 2e-14
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Frame = +2
Query: 167 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTCHX 337
+ + + T+YVG LD V+E + LF Q G V + ++ + Y F+EF
Sbjct: 6 IAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEE 65
Query: 338 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 517
MN V K ++VN A++ + D + +F+G+L E++ +L + F+
Sbjct: 66 DADYAIKVMNMIKVYGKPIRVNKASA--HNKNLDVGAN--LFIGNLDTEVDEKLLYDTFS 121
Query: 518 PFGEISNC-RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
FG I +I+RD T SKG+AF++F ++AAI+AMN
Sbjct: 122 AFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMN 163
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +2
Query: 428 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 607
P + + I+VG L ++ ++ E F G + N + +D T +GY FV F+ +
Sbjct: 5 PIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
Query: 608 ADAEAAIQAMN 640
DA+ AI+ MN
Sbjct: 65 EDADYAIKVMN 75
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 65.3 bits (152), Expect = 4e-11
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Frame = +2
Query: 191 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR-EPGNDPYAF--LEFTCHXXXXXXXXX 361
TL V + +T+ +F + + CKI+R +P Y F +++
Sbjct: 48 TLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDK 107
Query: 362 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 541
+N + +K +KV ++ +P D + +++V ++ ++ R+AF +G I NC
Sbjct: 108 LNGFTIGNKVLKVAFS-----RPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNC 162
Query: 542 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
R++RD T KG FV + KKA+A+AAI +++
Sbjct: 163 RLLRDKSTGLPKGCGFVLYDKKAEAQAAISSLS 195
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 425 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 604
+P+ + + V + ++ R F ++NC+IVR + S G+ FV +
Sbjct: 38 EPQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNT 97
Query: 605 KADAEAAIQAMN 640
DA+ AI +N
Sbjct: 98 TEDAQKAIDKLN 109
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
++V ++ + + F G ++ I+ D Q + KG+ FV+ + +A+ AIQ +
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTL 336
Query: 638 N 640
N
Sbjct: 337 N 337
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 63.3 bits (147), Expect = 2e-10
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Frame = +2
Query: 170 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXX 340
G L + + PS+++ + +FG +G+V CK+IR+ YAF+ +
Sbjct: 21 GTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDD 80
Query: 341 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAP 520
MN + +K +KV++A +P + + ++++ L +++ + F P
Sbjct: 81 ANKAVREMNGARLQNKTLKVSFA-----RPSSTEIKNANLYISGLPKDMKEEEVEALFKP 135
Query: 521 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
FG+I ++++D + +G FV F K+ +A+ AI +N
Sbjct: 136 FGKIITSKVLKDVSG-EGRGTGFVRFDKRCEAQTAIDDLN 174
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
IFV L E L + F+P+G I+N + D KGY FV+ +A AI +
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLD------KGYGFVNMSNYEEACHAICCL 327
Query: 638 N 640
N
Sbjct: 328 N 328
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 60.9 bits (141), Expect = 9e-10
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Frame = +2
Query: 170 GDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEF--TC 331
G ++P +LYVG+L P VTE L F G V ++ R+ + YA++ F
Sbjct: 6 GAANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPG 65
Query: 332 HXXXXXXXXXMNKRVVLDKEMKV-NWATSPGNQPK--TDTSNHHHIFVGDLSPEIETNIL 502
H ++ ++ DK++ V W + K T +++V + +++ +
Sbjct: 66 HDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQM 125
Query: 503 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
+E A G+I + +++ DP+ KSKG+ FVSF +AE A+ +N
Sbjct: 126 KEICAEAGKIVSLKVMTDPEG-KSKGFGFVSFETPEEAEEAVNVLN 170
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = +2
Query: 428 PKTDTSNHH--HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 601
P T +N+ ++VGDL+P++ +L E F+ G + + R+ RD T +S GYA+V+F
Sbjct: 3 PSTGAANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNF- 61
Query: 602 KKADAEAAIQAM 637
++ +AA++A+
Sbjct: 62 QQPGHDAALEAI 73
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 455 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 634
++++ +L I+ LRE F+P+G IS+ ++++D + SKG+ FV F +A A+
Sbjct: 213 NLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKG-NSKGFGFVCFSSPEEATKAVTE 271
Query: 635 MN 640
MN
Sbjct: 272 MN 273
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +2
Query: 194 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR-EPGNDP-YAFLEFTCHXXXXXXXXXMN 367
LY+ NLD + + L F G + K+++ + GN + F+ F+ MN
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 368 KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVG 469
R+++ K + V A + + H H G
Sbjct: 274 GRILISKPLYVALAQRREERKAQLAAQHMHRISG 307
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 58.0 bits (134), Expect = 6e-09
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Frame = +2
Query: 194 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHXXXXXXXXXM 364
+YVG+++ + E + T F G + + +P N +AF+E+ M
Sbjct: 104 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQM 163
Query: 365 NKRVVLDKEMKVNWATS-PGNQP-----KTDTSNHHHIFVGDLSPEIETNILREAFAPFG 526
N ++ + +KV ++ P P + + + I++ + P++ + ++ F FG
Sbjct: 164 NGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAFG 223
Query: 527 EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
++ +C + ++P T K KGY F+ + + A AI +MN
Sbjct: 224 KVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMN 261
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 54.4 bits (125), Expect = 7e-08
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 443 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 622
+N +VG L+ E++ +L AF PFG+I++ +I D T K +G+ FV F D A
Sbjct: 2 ANKRVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAA 61
Query: 623 AIQAMN 640
AI MN
Sbjct: 62 AIDNMN 67
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/65 (43%), Positives = 35/65 (53%)
Frame = +2
Query: 446 NHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 625
N IF GDL E+ L AFA + +IVRD ++ KSKGY FVSF D A
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 626 IQAMN 640
++ MN
Sbjct: 275 MREMN 279
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +2
Query: 437 DTSNHHH---IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 607
D S H I V +LS E + L+E F P G IS + +D T +SKG+AF++FV +
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHR 232
Query: 608 ADAEAAIQAMN 640
DA AI+ ++
Sbjct: 233 EDAARAIEVLS 243
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
++VG L I +++ F PFG + + +++ D +T +SKGY FV F + A+ A++ M
Sbjct: 244 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 303
Query: 638 N 640
N
Sbjct: 304 N 304
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 416 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 595
P + + + +F L+ I L E F+ G++S+ RI+ D + +SKG A++
Sbjct: 134 PMTEESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIE 193
Query: 596 FVKKADAEAAI 628
F K+ AI
Sbjct: 194 FTDKSAVPLAI 204
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 185 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXX 355
P LYVG+L ++TE + +F G V ++I + + Y F++F
Sbjct: 241 PTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
Query: 356 XXMNKRVVLDKEMKVNWATSPGN 424
MN + + +K+ T G+
Sbjct: 301 EQMNGFELAGRPLKIGPVTERGD 323
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +2
Query: 416 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 595
PG + H IF+G L + + ++E + FGE+ +V+D T SKGYAF
Sbjct: 661 PGVVSTVVPDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCE 720
Query: 596 FVKKADAEAAIQAMN 640
+V + AIQ +N
Sbjct: 721 YVDLGITDVAIQGLN 735
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DKEMKVNWATSP-GNQPKTDTSNHHHIFVGDLS----PEIETNI-LREAFAPFGEISNCR 544
D K SP G +P+T + + VGDL P T ++E F FGEI C
Sbjct: 86 DSASKRKIEESPIGKEPETKITKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCE 145
Query: 545 IVRDPQTLKSKGYAFVSFVKKADAE 619
+ DP T +S+G+ FV F K DA+
Sbjct: 146 VKLDPNTRRSRGFGFVRFKKDEDAK 170
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 425 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVK 604
+PK + + +FVG L L E FA FGE+++ I P+ + + FV+F
Sbjct: 190 RPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRH--FGFVTFAS 244
Query: 605 KAD-AEAAIQAMN 640
A+ A + MN
Sbjct: 245 VANCVSIAFENMN 257
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 185 PKTLYVGNLDPSVTEVFLCTLFGQIGDV 268
PK L+VG L S TE L F Q G+V
Sbjct: 198 PKKLFVGRLPESTTEKTLMEYFAQFGEV 225
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 625
+FVG + E + LR+ FA FGEI +++D T KSKGY FV+ AE A
Sbjct: 12 LFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELA 67
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
++VG+L + + L + F +G++ I+RD +T +S+G AF+ F+ + A+ A+ A+
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 638 N 640
N
Sbjct: 72 N 72
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +2
Query: 191 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXXXXXXXXX 361
T+YVGNL S+T L +F + G V I+R+ + AF+ F
Sbjct: 11 TVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
Query: 362 MNKRVVLDKEMKVNWATSPGNQPK 433
+NK+ + + +K A G P+
Sbjct: 71 VNKKQMFGRTIKCTIAKDNGRAPE 94
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 45.6 bits (103), Expect = 3e-05
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 10/154 (6%)
Frame = +2
Query: 167 MGDESHPKTLYVGNLDPSVTEVFLCTLF-----GQIGDVKGCKIIREPGNDP--YAFLEF 325
MGD+S L+VG L+ TE + F G DV + + P + F+EF
Sbjct: 1 MGDDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEF 60
Query: 326 TC-HXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 502
+ + +K+++V A + + +F+G L E +
Sbjct: 61 SNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDV 120
Query: 503 REAFAPFGEIS--NCRIVRDPQTLKSKGYAFVSF 598
+ A AP + ++VRD +T K KGY FV+F
Sbjct: 121 KTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNF 154
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 419 GNQPKTDTSNHHHI-FVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 595
G+ P D ++ FV L+P L F+ FG I +C ++RD +T +S YAF+
Sbjct: 108 GDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIE 167
Query: 596 FVKKADAEAAIQAMN 640
F K D E A M+
Sbjct: 168 FEKDEDCERAYFKMD 182
Score = 34.3 bits (75), Expect = 0.085
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 194 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXXM 364
L+V L+P T+ L +F + G + C++IR+ YAF+EF M
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 365 NKRVVLDKEMKVNWATS 415
+ ++ D+ + V+++ S
Sbjct: 182 DNVLIDDRRIHVDFSQS 198
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 425 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 598
Q T+ +FVG L+ E LRE F +GE+++ ++ D T KS+G+ +V+F
Sbjct: 5 QENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 44.4 bits (100), Expect = 8e-05
Identities = 33/127 (25%), Positives = 58/127 (45%)
Frame = +2
Query: 173 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXX 352
D +TL+VGN++ + T L F + G+V I ++PGN+PYAF++F
Sbjct: 244 DPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAIQA 303
Query: 353 XXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 532
M++ V +KV + K + N I+VG ++ + + F +G +
Sbjct: 304 RRKMDREYVGRNRVKVGFG-------KVNPIN--TIWVGGVTNSLSEQQVERHFGRYGRV 354
Query: 533 SNCRIVR 553
+ I R
Sbjct: 355 TKVVINR 361
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 634
+FVG++ L+EAF +GE+ + I + P + YAFV F A+ +AIQA
Sbjct: 251 LFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQP---GNNPYAFVQF---AELSSAIQA 303
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +2
Query: 464 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
V +L+ L++ F +G++ + I RD T +S+G+AFV F +K DAE A+ M+
Sbjct: 20 VDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMDCMD 78
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 437 DTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 610
D ++ H +F+G+L +IE LRE F G + + R++RD +T KG+ +V F K
Sbjct: 49 DKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESK- 107
Query: 611 DAEAAIQAMN 640
DA MN
Sbjct: 108 DAVVFALKMN 117
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 628
I++ D P+I + L F P+G I + I+R QT KSKG+ +V++ A+ A+
Sbjct: 65 IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIR-TQTGKSKGFGYVTYENAESAQRAL 120
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+FV ++ E + + + E F+ +GEI N + D +T KGYA V + +A++A++A+
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 638 N 640
N
Sbjct: 355 N 355
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/71 (36%), Positives = 36/71 (50%)
Frame = +2
Query: 428 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 607
P D SN +F+ L E L + F PFG + + ++ D QT SK + FVS+
Sbjct: 272 PGPDGSN---LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNV 328
Query: 608 ADAEAAIQAMN 640
A+ AIQ MN
Sbjct: 329 MSAQNAIQHMN 339
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 622
+FVG LS E L+E F+ +GE+ I D T + +G+AFV F +++A+A
Sbjct: 31 LFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADA 85
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFA-PFGEISNCRIVRDPQTLKSKGYAFVSF 598
IFVG L PE +RE F + + + + + + +G+ FVSF
Sbjct: 105 IFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSF 152
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 500 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 631
LR F FG+I +IVRD +T ++KGY +V F K + A A++
Sbjct: 69 LRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALE 112
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+FVG++ E L+E F+ G + + R+V D +T K KGY F + + A +A++ +
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 638 N 640
N
Sbjct: 87 N 87
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+++G LS ++ N+L E F FG + + I+RD ++ KS+ FV F AEAA M
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSDVAEAANVGM 584
Query: 638 N 640
N
Sbjct: 585 N 585
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 500 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 598
LR+ F FGE+ C ++RDP T +S+G+ F++F
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTF 156
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +2
Query: 173 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-------YAFLEFTC 331
D + L++GNLD ++E + + Q G+++ + + GN P Y F+EF
Sbjct: 382 DAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFH-GNGPNRGEPRGYCFVEFKK 440
Query: 332 HXXXXXXXXXMNKRVVLDKEMKVNWA 409
+NK++VL + + V+WA
Sbjct: 441 KEDARKALRGLNKKIVLSRALVVDWA 466
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
I++G + N +++ F FG ++ R+ R ++ +SKGYAFV F A+ A M
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTM 159
Query: 638 N 640
+
Sbjct: 160 H 160
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 173 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHXXX 343
DE P +Y+G++ E + F Q G V ++ R + YAF+EF C
Sbjct: 93 DELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVA 152
Query: 344 XXXXXXMNKRVVLDKEMK 397
M+ ++ + +K
Sbjct: 153 KIAADTMHNYMMFGRLLK 170
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 500 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
L + F PFG + + ++ D QT SK + FVS+ A+ AIQ MN
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMN 324
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 191 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCH-XXXXXXXXXMN 367
TLYVG L+ VTE L F Q G+++ ++ AF+ FT N
Sbjct: 305 TLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQN---CAFVCFTSRAAAEAAADRSFN 361
Query: 368 KRVVLDKEMKVNWATSPGNQPKTDTSNHH 454
K ++ + +K+ W S G QP H
Sbjct: 362 KLILKGRRLKIMWGKSQGQQPAPGRQGGH 390
Score = 31.1 bits (67), Expect = 0.80
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 422 NQPKTDTSNHHHI---FVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 592
+ P DT I +VG L ++ LR+ F FGE+ + +V P+ + AFV
Sbjct: 291 SMPMLDTPTDRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMV--PR----QNCAFV 344
Query: 593 SFVKKADAEAA 625
F +A AEAA
Sbjct: 345 CFTSRAAAEAA 355
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 188 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEF 325
+T++V NLDP +T L + F GD+K ++ + G YA++EF
Sbjct: 72 RTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEF 118
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 631
+FV +L PEI +L F+ G+I R+ D K YA++ F + +A+Q
Sbjct: 74 VFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDG--KPTRYAYIEFAETQAIVSALQ 129
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+FVG+L E + +P+G I +VR T SKGY FV + + +A A Q +
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Score = 38.3 bits (85), Expect = 0.005
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Frame = +2
Query: 113 ILVFIDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR- 289
++ F++ K D+ N+ L+VGNL TE L G+++ ++R
Sbjct: 90 VISFLNTCKYHDKT--LNVSPAPPESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRS 147
Query: 290 EPGNDP--YAFLEF-TCHXXXXXXXXXMN--KRVVLDKEMKVNWATSPGNQPKTDTSNHH 454
E D Y F+E+ T +N + + + ++V +A S N +
Sbjct: 148 EVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGGRILRVAFAES--NLLTYADVHSR 205
Query: 455 HIFVGDLSPEIETN-ILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 631
+FV L + + +++E F+ G ++ ++ +P S+G+AFV + +AE +
Sbjct: 206 TLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQR 265
Query: 632 AMN 640
A N
Sbjct: 266 AHN 268
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
++VG+L +++ L AF FG +S + R+P G+AFV + DAE A++ +
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLSKVWVARNP-----PGFAFVEYEDYRDAEEAVREL 60
Query: 638 N 640
+
Sbjct: 61 D 61
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 500 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
+R AF +G I + +V+D T +++G +V FVK + A A + M+
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAALACEEMD 85
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+F+G + + + L GEI R+ DP T +KG+AF +F ++ A AI +
Sbjct: 155 VFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAITTL 214
Query: 638 N 640
N
Sbjct: 215 N 215
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAE 619
IFV + E + LR F +G + +IVRD + SKGYAF++F + A+
Sbjct: 10 IFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGV-SKGYAFITFESQEVAD 62
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEF 325
MGD+ K ++V + TE L F + G VK KI+R+ + YAF+ F
Sbjct: 1 MGDQDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITF 55
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 598
+F+ +LS + + F FG+I+ C++V D T SKG AFV +
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKY 464
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = +2
Query: 125 IDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGC-----KIIR 289
+ VK VI+ ++ S L + NL + TE L F G+V K+ R
Sbjct: 226 VKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGR 285
Query: 290 EPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWA 409
+ F++FT MN + +L + + V+WA
Sbjct: 286 RNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAVDWA 325
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 191 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 286
T+++ NL T+ + LF Q GD+ CK++
Sbjct: 417 TVFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 35.9 bits (79), Expect = 0.028
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = +2
Query: 188 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 367
K L V +LD T L F + G++ G ++ A + F + N
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIVFFRNLKDIKKVVEEN 295
Query: 368 KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEI-ETNILREAFAPFGEISNCR 544
+ K +KV P N+ K +FV +LS + E ++LR F P+G+++
Sbjct: 296 HTI---KGLKVRTVQLP-NEEKQGV-RERTLFVDNLSEDTKELDVLRY-FRPYGQVAKVH 349
Query: 545 IVRDPQTLKSKGYAFV 592
I+ D +T KSKG V
Sbjct: 350 ILTDRETGKSKGCGVV 365
Score = 35.5 bits (78), Expect = 0.037
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 428 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 598
PK N +FVG L+ + L++ F FGE+ + RI+R S+ Y FV F
Sbjct: 72 PKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGY-SRNYGFVLF 127
Score = 33.1 bits (72), Expect = 0.20
Identities = 30/127 (23%), Positives = 51/127 (40%)
Frame = +2
Query: 176 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXX 355
E + ++++VG L E L F Q G+V+ +I+R FL ++ +
Sbjct: 76 EKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-------TFLGYSRNYGFVLFK 128
Query: 356 XXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEIS 535
+ VL K +N T + + N I+VG L +RE F FG I
Sbjct: 129 DDGPSKEVLKKSHVINGKTVDVGKSR----NFRVIYVGGLPSHFTEQTVREHFKKFGVIE 184
Query: 536 NCRIVRD 556
+ + +
Sbjct: 185 AVKFIEN 191
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 398 VNWATSPGNQPKTDTSNHHHIF-VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKS 574
++ AT G + + H V +L + +L +AF+ FG++ +V D + +S
Sbjct: 107 LDMATRKGRTLRVRFATHAAALRVKNLDNLVTNELLEQAFSQFGDVERAVVVCDVRG-RS 165
Query: 575 KGYAFVSFVKKADAEAAIQAMN 640
KG+ V F +K +A A+Q ++
Sbjct: 166 KGHGIVEFSRKNNAHNAMQKIS 187
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 179 SHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 286
+H L V NLD VT L F Q GDV+ ++
Sbjct: 123 THAAALRVKNLDNLVTNELLEQAFSQFGDVERAVVV 158
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGE-ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 628
IFVG L P + + E F+ GE + + + +R KSKG+AFV KK E+ +
Sbjct: 44 IFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSG-KSKGFAFVRLRKKEAVESVL 100
Score = 34.3 bits (75), Expect = 0.085
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 1/148 (0%)
Frame = +2
Query: 176 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGD-VKGCKIIREPGNDPYAFLEFTCHXXXXXX 352
E +T++VG+L PS E + F +G+ V+ K IR F
Sbjct: 38 EQSRRTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVE 97
Query: 353 XXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 532
V+D S + K DT + + + ++ I + + E F+ GEI
Sbjct: 98 SVLGRDDHVIDN--------SDVSMEKQDT--YRKVILKNIPSSIGESQILEHFSSSGEI 147
Query: 533 SNCRIVRDPQTLKSKGYAFVSFVKKADA 616
++ I + +T + KG+ V+F +A
Sbjct: 148 ASVYIPENLKTKERKGHCIVTFASVTEA 175
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+FVG + ++ + L F G I R++ D +++GYAFV + K DA+ ++ +
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNG-QNRGYAFVVYTSKDDAKRCVKTL 134
Query: 638 N 640
N
Sbjct: 135 N 135
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+F+G + + + L F G I + R++ DP + +KG+AF +F K +A+ A++ +
Sbjct: 154 VFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKKL 213
Query: 638 N 640
+
Sbjct: 214 D 214
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 34.7 bits (76), Expect = 0.065
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 392 MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLK 571
M V T+ G D SN +FVG + E LR F P+G+I I++D T +
Sbjct: 151 MDVKTITNGGTTSVRD-SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQ 209
Query: 572 SKG--YAFVSFVKKADAEAAIQAM 637
K FV + K E ++ M
Sbjct: 210 HKDDRKLFVGMISKHAKEEDLRVM 233
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRD 556
+FVG +S + LR F+PFG I ++R+
Sbjct: 216 LFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+++G+L+ + + +AF FG + I+RD ++ +S+G+ FV AI+ M
Sbjct: 11 LYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKM 69
Query: 638 N 640
N
Sbjct: 70 N 70
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 500 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
L++ F+ FG++ + R + KG+AF+ F K AE +Q N
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFN 150
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 188 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG 298
KTL+V N+ P T++ + LFG+ G VK + ++PG
Sbjct: 42 KTLFVINVPPYCTKLAIKKLFGKCGGVKSVYLHKQPG 78
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 631
+F+G+LS + + L F G + CR++ Q +S+G+ + F K D A++
Sbjct: 182 VFLGNLSFDADEETLAAFFEEKGLSATCRVI--TQEGRSRGFGYADFTSKEDYNKALE 237
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 521 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
+GEI N +VRD +T K KG+ F+ + + A+ N
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFN 41
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 521 FGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
+GEI N +VRD +T K KG+ F+ + + A+ N
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFN 41
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 443 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 580
SN +FVG++ ++ L++ F FG++ +I+ D +SKG
Sbjct: 76 SNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_9041| Best HMM Match : RRM_1 (HMM E-Value=1.4e-10)
Length = 141
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 200 VGNLDPSVTEVFLCTLFGQIGDVKGCKIIR 289
+ NL P+V+ + LFG IG +K CK++R
Sbjct: 20 ISNLHPAVSRQDIEELFGAIGVLKSCKMLR 49
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 428 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 607
P T + + +L P + + E F G + +C+++R G A V + K
Sbjct: 8 PSTTPQTSTRVTISNLHPAVSRQDIEELFGAIGVLKSCKMLR-------AGMAEVVYTTK 60
Query: 608 ADAEAA 625
DA A
Sbjct: 61 EDAVTA 66
>SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 200 VGNLDPSVTEVFLCTLFGQIGDVKGCKIIR 289
+ NL P+V+ + LFG IG +K CK++R
Sbjct: 225 ISNLHPAVSRQDIEELFGAIGVLKSCKMLR 254
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 428 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 607
P T + + +L P + + E F G + +C+++R G A V + K
Sbjct: 213 PSTTPQTSTRVTISNLHPAVSRQDIEELFGAIGVLKSCKMLR-------AGMAEVVYTTK 265
Query: 608 ADAEAA 625
DA A
Sbjct: 266 EDAVTA 271
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISN--CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 631
+FVG L P+I+ + + +F FG ++ KGYAF+ ++++ + I
Sbjct: 346 VFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKLIS 405
Query: 632 A 634
A
Sbjct: 406 A 406
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAF-APFGEISNCRIVRDP-------QTLKSKGYAFVSFVKKAD 613
++ G+L ++ + L+ F A +++ IV++P Q +S+G+ FV+F D
Sbjct: 52 VYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPED 111
Query: 614 AEAAIQAMN 640
A+ A++++N
Sbjct: 112 AQTAVKSLN 120
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+++G++ + F FG + + + R+P G+AF F + DAE A++ +
Sbjct: 4 VYIGNIGDNASKREIEREFETFGPLRDVWVARNPP-----GFAFCVFEDRRDAEDAVREL 58
Query: 638 N 640
+
Sbjct: 59 D 59
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
+++G L + F +G + + + R+P G+AF F + DAE A++ +
Sbjct: 34 VYIGSLGDNASKREIENEFGYYGPLKDVWVARNPP-----GFAFCIFDDRRDAEDAVREL 88
Query: 638 N 640
+
Sbjct: 89 D 89
>SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 365
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 388 LVEDHSLVHGGQRCGRRRVTRKLEKCIRVISWLPYNLATFYIAYL 254
LV D+S C RRRV R + K I+ + + TF+ ++
Sbjct: 224 LVSDNSFSDSSDECERRRVQRCIRKRIKTTKNILLVVCTFFFCWM 268
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.1 bits (62), Expect = 3.2
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Frame = +2
Query: 173 DESHPKTLYVGNLDPSVT--EVFLC-TLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXX 343
D +TL+VGNL+ ++ ++ L FG + DV + R GN YAF++F
Sbjct: 232 DPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGN-TYAFVKFADLDVA 290
Query: 344 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 523
M + + +K+ + S Q T ++VG L P I L F F
Sbjct: 291 AKAKCAMQGQCIGRNHIKIGYGRS---QQTT------RLWVGGLGPWISIPELEREFDRF 341
Query: 524 GEI 532
G I
Sbjct: 342 GAI 344
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 161 ANMG-DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG-NDPYAFLEF 325
+NM S+ +YVGNL V E L +F + G + + G P+AF+EF
Sbjct: 251 SNMNRSNSNDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEF 307
>SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095)
Length = 142
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +2
Query: 374 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 553
++LD+ K+ T + + HH I G +P I+ N LRE +A F +++
Sbjct: 3 IILDEGHKIKNVTKTSKNVRAIPAKHHFILTG--TP-IQNN-LREMWALFDFTCQGQLLG 58
Query: 554 DPQTLKSKGYAFVSFVKKADAEA 622
+T K + + ++ ++ DA A
Sbjct: 59 SSKTFKQEYESPITRARERDASA 81
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 637
I+V ++ + L+ F +G+I R +RD Y FV F K+ A AI +
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRD--------YGFVYFAKRESAVQAIDGI 55
Query: 638 N 640
N
Sbjct: 56 N 56
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +2
Query: 416 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 595
P + K +F+G L I +I+ E F GEI++ RI + + ++ + +
Sbjct: 339 PMQKQKEKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRISKG-KGENARKFCHLR 397
Query: 596 FVKKADAEAAI 628
F K + A+
Sbjct: 398 FGAKESVDTAV 408
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 506 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN 640
E F+ FG++ + D +S G A V FV++ DA+ A++ N
Sbjct: 1 ELFSEFGQVKRSCVHYDASG-RSHGTAEVVFVRREDAQQALKQYN 44
>SB_54437| Best HMM Match : DUF226 (HMM E-Value=2)
Length = 364
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 116 LVFIDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLF---GQIGDV-KGCKI 283
LV + +KK+ID+ + E HP L +PS F Q+ V K C+
Sbjct: 24 LVIVRIKKIIDQFHLVGIWREKHPNELAYTWCNPSYKVQCRLNYFLISSQLSQVTKDCEN 83
Query: 284 IREPGNDPYAFL 319
+P +D A L
Sbjct: 84 FFDPFSDHSAIL 95
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREA-FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 634
I++ +L+ +I+ L+++ +A F + + +TLK +G AFV F A A+++
Sbjct: 9 IYIKNLNEKIKKEELKKSLYAIFSQFGPILDIVALKTLKMRGQAFVVFKDIGSATNALRS 68
Query: 635 M 637
M
Sbjct: 69 M 69
>SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30)
Length = 343
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 301 ISWLPYNLATFYIAYLTKQR 242
I W+PY+ T YI+Y+ K +
Sbjct: 251 ICWVPYHALTLYISYVWKNK 270
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 458 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 625
+FV P+ + N +AF +V + + K +GYAF+ + + D AA
Sbjct: 8 VFVYSGDPQTDPNAYGDAFKTLFIGRIISMVYNSKASKPRGYAFIEYEHERDMHAA 63
>SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30)
Length = 343
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 301 ISWLPYNLATFYIAYLTKQR 242
I W+PY+ T YI+Y+ K +
Sbjct: 251 ICWVPYHALTLYISYVWKNK 270
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,929,585
Number of Sequences: 59808
Number of extensions: 421832
Number of successful extensions: 976
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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