Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e08
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 35 0.036
11_06_0618 + 25565780-25566064,25566855-25567046,25567144-255674... 31 0.77
04_01_0281 + 3760014-3760027,3760138-3761071 28 4.1
12_01_0120 + 912312-912615,913145-913371,913507-913754,914293-91... 28 5.4
05_01_0488 - 4070506-4072277,4072455-4072557 28 5.4
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 28 5.4
01_06_1027 + 33912773-33912816,33913245-33913401,33913492-339135... 28 5.4
12_01_0973 - 9803378-9803724,9804057-9804163,9804208-9804443,980... 27 7.2
07_03_1013 + 23299569-23300630 27 7.2
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 27 7.2
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 27 7.2
03_05_1166 - 30876802-30876899,30877233-30878685 27 7.2
03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711,550... 27 7.2
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 27 7.2
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 27 9.5
04_04_1441 - 33621423-33622118,33622251-33622315,33623140-336232... 27 9.5
03_05_0071 - 20491521-20492813 27 9.5
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 35.1 bits (77), Expect = 0.036
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 406 TTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPK 534
T EDI+D E +Q + AKEA+A ER+L + +PK
Sbjct: 343 TLEDIEDLKRQERSRQQRILKAKEALAAAERELDDLQPYEAPK 385
>11_06_0618 +
25565780-25566064,25566855-25567046,25567144-25567416,
25567636-25567738,25568273-25568391,25568615-25568782,
25568908-25569386,25569742-25569850,25569905-25570070,
25571405-25571433
Length = 640
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 370 AALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIA--NLERDLQKMDTKSSP 531
AAL ST +G T +D ++H D K+ + KEA A NLER L+ + +SSP
Sbjct: 424 AALMSTYVG---TDKDTEEHKNQNSDTKELYRQDKEADAEKNLERFLEAL--RSSP 474
>04_01_0281 + 3760014-3760027,3760138-3761071
Length = 315
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +1
Query: 298 EEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAK 474
E L E +++V +EAA + G ++ T +++ DH M+ E++ S+ + K
Sbjct: 236 ENNMLWLEVERLMMELRVMAHKKEAAANAFGAEKAETMKELKDHEMNVEEITTSMDLMK 294
>12_01_0120 +
912312-912615,913145-913371,913507-913754,914293-914656,
914758-915154,915671-915693,916645-916987,917513-917532,
918418-918527,919484-920255
Length = 935
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +1
Query: 130 FSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKR 309
FS ++ER S +++D +++NV D N + P++ K L + DEE
Sbjct: 680 FSFCKLQERLSPHYSQMDQGVDKNVTD---NSLVSNCDFPVVKK------LEKCVDEEVS 730
Query: 310 LTSSRENCNEKVKVKLCDEE 369
+ SS EN + + +CD E
Sbjct: 731 VQSSFENKDTRSLGMVCDHE 750
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +1
Query: 160 STAQAELDHHLNQNVDDGISNGRSL-HAKKPIIVKKKIGYHLYR---DSDEEKRLTSSRE 327
S++ +E D L++ ++ NG S+ +A I++ + H R D+ EEK + R
Sbjct: 153 SSSSSESDLELDEAKEE---NGNSIFYALSQKIIELEDELHEVRGKLDASEEKNM---RC 206
Query: 328 NCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 504
+CN +L + E + + S+ +D+D+ +E ++ + + K+ I L+ +
Sbjct: 207 HCNFGANSELSEHEEKQQVSDVETSSLQKDLDEVKSEKEALEAVVLVNKDEIDRLKESM 265
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 337 EKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQ 507
E K ++ D E L S S TE++ H SEE +K+ + +++ +LQ
Sbjct: 275 ELSKSQVDDLEQKLASQDANISHLTEELSLHRSSEESLKEKTLKLENELSSAHEELQ 331
>01_06_1027 +
33912773-33912816,33913245-33913401,33913492-33913589,
33913680-33913775,33914422-33914681,33914778-33915088,
33915154-33915297,33915452-33915589,33915674-33915721,
33916328-33916408,33916705-33916864,33917411-33917532
Length = 552
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +1
Query: 340 KVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT 519
++ + + + A + ++T + D+H++ +ED+ +S K+ E + N LQ M
Sbjct: 34 RLSLMMAETRATYSRRAASKNTDIKKDDEHVLEKEDVAES-KLEIEQLRNDPDRLQSMTV 92
Query: 520 K 522
K
Sbjct: 93 K 93
>12_01_0973 -
9803378-9803724,9804057-9804163,9804208-9804443,
9804513-9804799,9806226-9806331
Length = 360
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 202 VDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENC 333
V+ I N S+H ++P +V ++ DEE++L S + C
Sbjct: 309 VEATIRNVISIHTRRPTLVLRRYLQDRMVKEDEEEQLKDSTDGC 352
>07_03_1013 + 23299569-23300630
Length = 353
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 280 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE---EDM 450
L++D DEE++ + ++K + DEE A +TT + D + E+
Sbjct: 158 LFQDQDEEEKTPKQYLDEDQKTLQQCQDEEKAPNQYEDEDNTTGQYQDGEQKTAEQCEEE 217
Query: 451 KQSLKMAKEAIANLERDLQKMDTK 522
K S K E +LE Q DTK
Sbjct: 218 KTSEKYHNEEHKSLEAQQQCQDTK 241
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Frame = +1
Query: 208 DGISNGRSLHAKKPIIVKKKIGYHLY-RDSDEEKRLTSSRENCNEKV-----KVKLCDEE 369
DG + GRSL +KP+ + Y R E ++T EN E ++ E
Sbjct: 419 DGFTTGRSLRDRKPVTYT----FDEYDRSISEAIKITKKGENSAEPAAPANRRILTPRPE 474
Query: 370 AALTSTGMGRSTTTEDIDDHLMSEEDMKQS 459
A+ G S TT + D + +D + S
Sbjct: 475 ASSNGKVNGLSPTTNEYDGNSSKSDDYRDS 504
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = +1
Query: 289 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS 459
+ +EE+ + E+ + ++ +EE +TG G E++ D +EE+ + +
Sbjct: 89 EGEEEEEEVEEEQGAGEEEEEEVDEEEIEAVTTGAGGDDDDEEVGDDGGAEEESQST 145
>03_05_1166 - 30876802-30876899,30877233-30878685
Length = 516
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 51 CCDIYYHSSPSPVR 92
CCDIY S+P PVR
Sbjct: 168 CCDIYLPSNPLPVR 181
>03_02_0080 +
5498638-5498699,5499121-5499190,5499551-5500711,
5500940-5501029,5501147-5501464
Length = 566
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = +1
Query: 220 NGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGR 399
N R +H + + H +E+K+L S + C KL + A S+ G
Sbjct: 414 NSRPVHDGLYRAIDMYLKEHPSLGKNEKKKLCSLMD-CK-----KLSPDACAHASSRSGA 467
Query: 400 STTTEDIDDHLMSEEDMKQSLK 465
+T TED D +M ED+ S K
Sbjct: 468 TTNTEDEWDGVMVVEDLSLSTK 489
>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 27.5 bits (58), Expect = 7.2
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Frame = +1
Query: 19 P*AMETLIVLFAVIYTIIAAPAQLGEHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQ 198
P A +T+ + IAAP L + L+ +T D +D + A E + HL++
Sbjct: 1344 PIASQTVRKALSYKEVAIAAPGTLVKALNDAQTEEKDATDAGANIETAKAPKESNGHLSK 1403
Query: 199 NVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAA- 375
D + + K+ G + D+E+ + + N +E K D A+
Sbjct: 1404 EKDGAVQVSPKDSTSQG---SKETGEGKSSNPDDEQTVVLAGSNQSETQPEKKRDLVASD 1460
Query: 376 LTSTGMGRSTTTE 414
++S+ +T TE
Sbjct: 1461 VSSSSQSLTTVTE 1473
>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 27.1 bits (57), Expect = 9.5
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 157 KSTAQAELDHHL--NQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSREN 330
KS AQ+E D +L + +DD + L + K + + + R++ K L S
Sbjct: 1049 KSAAQSEHDKNLLLQRQLDDSLREITMLRSSKIMTAEAE------RENSNLKNLVESLSK 1102
Query: 331 CNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERD 501
N + E LTS G T + + D ++Q+L +E + N+E +
Sbjct: 1103 NNSSL-------EYELTSARKGSDATMKKLKDVEGKCNHLQQNLDKLQEKLTNMENE 1152
>04_04_1441 -
33621423-33622118,33622251-33622315,33623140-33623227,
33623957-33625570
Length = 820
Score = 27.1 bits (57), Expect = 9.5
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Frame = +1
Query: 136 DTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLT 315
+ V E KST +++ ++ + + + + AKK +V+ + +DS +EK++
Sbjct: 300 EIAVPEFKSTEVTGVENGMDLD-EVKVEKKKKKKAKKASLVEGET--EGAKDSKQEKKVK 356
Query: 316 SSRENCNEKVKVKLCDE-EAALTSTG--------MGRSTTTEDIDDHLMSEEDMKQSLKM 468
++ +K KV++ DE + ST MG T D+ LMS KQ K
Sbjct: 357 KEKKEKKKKKKVEVVDEGDVTEQSTDAPAEEDQQMGDGTEAVTFDETLMSNL-QKQFEKA 415
Query: 469 AKEA 480
A EA
Sbjct: 416 AAEA 419
>03_05_0071 - 20491521-20492813
Length = 430
Score = 27.1 bits (57), Expect = 9.5
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 229 SLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNE---KVKVKLCDEEAALTSTGMGR 399
S A K + +K+I L D +E+ + E + K +L D+ + S G
Sbjct: 146 SEQAVKARLKRKRIKSDLAEDERQERMIARQIERAQQSMGKTNGELGDDASPDGSEGESG 205
Query: 400 STT--TEDIDDHLMSEEDMKQSLKMAKEAIANLER 498
S ++ +DH EED K++ K A + L+R
Sbjct: 206 SEDEYSDSENDHEGQEEDAKEANKAAGKIAIALQR 240
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.130 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,506,417
Number of Sequences: 37544
Number of extensions: 188593
Number of successful extensions: 623
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -