Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e08
(536 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 31 0.64
At1g01690.1 68414.m00087 expressed protein 30 0.85
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.1
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,... 30 1.1
At3g62620.1 68416.m07034 sucrose-phosphatase-related contains we... 29 1.5
At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha catal... 29 2.0
At1g20290.1 68414.m02533 hypothetical protein 29 2.0
At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative simil... 29 2.6
At2g22720.3 68415.m02692 expressed protein 28 3.4
At2g22720.2 68415.m02691 expressed protein 28 3.4
At2g22720.1 68415.m02693 expressed protein 28 3.4
At1g22260.1 68414.m02782 expressed protein 28 3.4
At5g44900.1 68418.m05505 disease resistance protein (TIR class),... 28 4.5
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 28 4.5
At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains ... 28 4.5
At5g60030.1 68418.m07527 expressed protein 27 6.0
At5g20610.1 68418.m02448 expressed protein 27 6.0
At4g36105.1 68417.m05139 expressed protein 27 7.9
At1g70810.1 68414.m08168 C2 domain-containing protein similar to... 27 7.9
At1g35660.1 68414.m04432 expressed protein 27 7.9
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 0.64
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 388 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 510
G G S DI+ +L S+ED+K ++ AK A +++ L++
Sbjct: 337 GQGESIEDSDIEKNLESKEDVKSEVEAAKNAGSSMTGKLEE 377
>At1g01690.1 68414.m00087 expressed protein
Length = 742
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 148 RERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRE 327
R+++S + E+D+ N + D + ++LH I++K H R +KRL ++
Sbjct: 389 RKKRSPQEEEVDNENNSSEDSRLMGAKNLHLFLSEIMRKL--KHAIRKEKPDKRLLGKKK 446
Query: 328 NCNEKVKVK 354
+ + + K
Sbjct: 447 SFEKSLSTK 455
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 1.1
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 130 FSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKR 309
F TV E K A HHL D+ S SL ++P ++ K L + +
Sbjct: 162 FDPHTVSELKQFADRFSAHHL----DEACSKYISLWKQRPDLIDMKYSNQLAGVDNVSLQ 217
Query: 310 LTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED-IDDHLMSEEDMKQSLKMAKEAIA 486
S+R+ N + + ++ A TST T+D +D + + + + +++ +
Sbjct: 218 KDSTRQKQNAVNESEHQIQQCATTSTKRNEEEKTDDSLDVTSSTVKTTQHTRRLSVQDRI 277
Query: 487 NLERDLQKMDTKS 525
NL + QK ++ S
Sbjct: 278 NLFENKQKENSPS 290
>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 793
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 289 DSDEEKRLTSSRENCNEK--VKVKLCDEEAALTSTGMGRSTTTED--IDDHLMSEEDMKQ 456
DSD+ + E+ N++ + D+ +L + T E +DD ++EE +K
Sbjct: 407 DSDDNGMVLDRGEDSNQEGMYDQEFEDDGKSLNLRDIDTETQNESEMVDDEDLTEEQIKD 466
Query: 457 SLKMAKEAIANLERDLQKMDT 519
+K KEA A+ E +++T
Sbjct: 467 EIKKIKEAYADDEEFPDEVET 487
>At3g62620.1 68416.m07034 sucrose-phosphatase-related contains weak
similarity to sucrose-phosphatase [Arabidopsis thaliana]
gi|11127757|gb|AAG31075
Length = 358
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +1
Query: 289 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 468
DS E+ ++ +N ++ L EEA+ GM ++ ED+D L+ + + + L++
Sbjct: 281 DSILEELNDATVDNSQWTAEIVLEAEEASKNQMGMRITSCLEDLDKQLLMQRILGKDLEV 340
Query: 469 AKEAIANLE 495
++ +LE
Sbjct: 341 LLHSVMHLE 349
>At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha
catalytic subunit, putative similar to SP|O48653 DNA
polymerase alpha catalytic subunit (EC 2.7.7.7) {Oryza
sativa}; contains Pfam profiles: PF03175 DNA polymerase
type B, organellar and viral, PF00136 DNA polymerase
family B, PF03104 DNA polymerase family B, exonuclease
domain
Length = 1492
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 418 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMD 516
+D+ LM EEDMK+S + E + L D+ K D
Sbjct: 239 MDNELMKEEDMKESEVIPSETMELLGSDIVKED 271
>At1g20290.1 68414.m02533 hypothetical protein
Length = 382
Score = 29.1 bits (62), Expect = 2.0
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 94 EHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQ-NVDDGISNGRSLHAKKPIIVKKKI 270
EH D FK + +S E K A A H LNQ N D SN + +IV KKI
Sbjct: 95 EH-DQFKWKHV-YSHIGSAEEKDGAVAIWLHSLNQRNYPDLRSNECK---RNEVIVYKKI 149
Query: 271 GYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTG--MGRSTTTED 417
G + EEK + +EN N ++ + D+ TS G M TT E+
Sbjct: 150 GEASEENIHEEK--ITVKENTNGNAELFVVDKVNDETSEGTIMEERTTLEE 198
>At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative similar
to HEMA2 [SP|P49294], HEMA1 [SP|P42804]
Length = 524
Score = 28.7 bits (61), Expect = 2.6
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Frame = +1
Query: 55 VIYTIIAA--PAQLGEHLDTFKTLNGDFS----DTTVRERKSTAQAELDHHLNQNVDD-- 210
VI+T ++ P L EH++ D++ D +V + AELD NVDD
Sbjct: 329 VIFTSTSSETPLFLKEHVEILPPCPADYARLFVDISVPRNVGSCVAELDSARVYNVDDLK 388
Query: 211 -GISNGRSLHAKK-----PIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEA 372
++ + A+K PII ++ I + +RDS + + E+++ + ++
Sbjct: 389 EVVAANKEDRARKSMEALPIIREETIEFEGWRDSLQTFPTIRKLRSKTERIRAECVEKLI 448
Query: 373 ALTSTGMGRST 405
+ GM + T
Sbjct: 449 SKHGNGMDKKT 459
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 121 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 270
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 356 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 405
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 121 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 270
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 459 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 508
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 121 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 270
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 127 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 176
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/78 (21%), Positives = 39/78 (50%)
Frame = +1
Query: 280 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS 459
L+R + ++ L S+ NEK+ D+E+ ++ R +T++ ID + +
Sbjct: 347 LFRVAATKEALESAGNELNEKIVELQNDKESLISQLSGLRCSTSQTIDKLESEAKGLVSK 406
Query: 460 LKMAKEAIANLERDLQKM 513
A+ AI+ L+ +++ +
Sbjct: 407 HADAESAISQLKEEMETL 424
>At5g44900.1 68418.m05505 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 274
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +1
Query: 172 AELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKV 351
A L ++N +DD GR L I + ++ ++ K T+SR +E K+
Sbjct: 40 ALLKENVNVFIDDHELRGRDLDHLFSRIEESRVALTIF-----SKNFTNSRWCLDELAKI 94
Query: 352 KLCDEEAALTSTGMGRSTTTEDI 420
K C ++ +LT + T+D+
Sbjct: 95 KECVDQESLTVIPIFFKMKTDDV 117
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 27.9 bits (59), Expect = 4.5
Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = +1
Query: 103 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHL 282
D+ + D V+++ +T + + + ++ S+ AKKP +VK
Sbjct: 236 DSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKN--AKPA 293
Query: 283 YRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL 462
+DS + + E+ +EK K + + T S++ E D+ +E+ K
Sbjct: 294 AKDSSSSEEDSDEEESDDEKPPTK---KAKVSSKTSKQESSSDESSDE--SDKEESKDEK 348
Query: 463 KMAKEAIANLER-DLQKMDTKSSPK 534
K+ +++E D ++ PK
Sbjct: 349 VTPKKKDSDVEMVDAEQKSNAKQPK 373
>At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains
similarity to NAD kinase [Homo sapiens]
gi|20070086|gb|AAM01195; contains Pfam domain, PF01513:
ATP-NAD kinase
Length = 985
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 244 KPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID 423
K +++ KK+G L ++ E +EN N V+ ++ D A + G ++ +D
Sbjct: 678 KTVLLLKKLGQELMEEAKEAASFLYHQENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTS 737
Query: 424 D 426
D
Sbjct: 738 D 738
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 286 RDSDEEKRLTSSRENC-NEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE-EDMKQS 459
R +++K+ + E+ +EKVK KL DE+ + + + ++ D+ ++ E E ++
Sbjct: 149 RKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDE 208
Query: 460 LKMAKEAIANLERDLQKMDTKSSPK 534
K A+ +D +D K K
Sbjct: 209 QKSAEIKEKKKNKDEDVVDEKEKEK 233
>At5g20610.1 68418.m02448 expressed protein
Length = 1164
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 361 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 504
D E+AL S M +T +ED +D + K + KE + + RD+
Sbjct: 503 DLESALKSVEMLEATASEDEEDRKKHGDKDKYFITPMKETVPSCSRDV 550
>At4g36105.1 68417.m05139 expressed protein
Length = 245
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 304 KRLTSSR-ENCNEKVKVKLCDEEAALTSTGM-GRSTTTEDIDDHLMSE-EDMKQSLKMAK 474
+R+T++ E C+ K KV +C+EE + + S E + +M+E E +K +L +
Sbjct: 109 RRVTAAESETCSHKEKVIICEEEITRKTVQIQNLSLRLEQTERIVMTECESLKNALTASN 168
Query: 475 EAIANL 492
+ L
Sbjct: 169 NVLDTL 174
>At1g70810.1 68414.m08168 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 165
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 244 KPIIVKKKIGYHLYRDSDEEKRLTSSRENC 333
KP + K+G D E KR+ +RENC
Sbjct: 91 KPFLEVHKMGLQELPDGTEIKRVVPNRENC 120
>At1g35660.1 68414.m04432 expressed protein
Length = 1155
Score = 27.1 bits (57), Expect = 7.9
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 280 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEA--ALTSTGMGRSTTT--ED--IDDHLMSE 441
L +SDEE LT +VK+ +EEA +T T T ED +DH +S
Sbjct: 385 LILNSDEESDLTFESNGVQREVKITDLEEEALDPVTIADHENETVTFSEDKFTEDHSVSN 444
Query: 442 EDMKQSLKMAKEAIANLERDLQKMDTKSS 528
S++ EA +L ++L D+ S
Sbjct: 445 IVPLVSVRPKLEANVSLCKELLHSDSPDS 473
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.130 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,779,886
Number of Sequences: 28952
Number of extensions: 169806
Number of successful extensions: 656
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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