Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e05
         (103 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   3.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    19   5.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 74  RDKQLXNQKXXSGEPEKPXVS 12
           RDK   N+K  S +   P V+
Sbjct: 687 RDKSKQNEKSPSPQQRSPSVT 707


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory
          receptor candidate 36 protein.
          Length = 355

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 9  YXNXRFLRFTAXXFLIXKLF 68
          Y + R +RF    F + +LF
Sbjct: 2  YFSRRDIRFLRPIFAVCRLF 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,811
Number of Sequences: 336
Number of extensions: 63
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 15
effective length of database: 117,545
effective search space used:  2115810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)