Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10e04
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D42041-1|BAA07642.1| 943|Homo sapiens KIAA0088 protein. 53 1e-06
AJ000332-1|CAA04006.1| 944|Homo sapiens Glucosidase II protein. 53 1e-06
AF144074-1|AAF66685.1| 966|Homo sapiens glucosidase II alpha su... 53 1e-06
BC112051-1|AAI12052.1| 914|Homo sapiens glucosidase, alpha; neu... 34 0.40
AF545046-1|AAN74757.1| 914|Homo sapiens neutral alpha-glucosida... 34 0.40
AF545045-1|AAN74756.1| 914|Homo sapiens neutral alpha glucosida... 34 0.40
BC093833-1|AAH93833.1| 914|Homo sapiens glucosidase, alpha; neu... 34 0.53
BC059406-1|AAH59406.1| 914|Homo sapiens glucosidase, alpha; neu... 34 0.53
AK074037-1|BAB84863.1| 925|Homo sapiens FLJ00088 protein protein. 34 0.53
AF153208-1|AAD34617.1| 247|Homo sapiens GC-rich sequence DNA-bi... 30 8.6
>D42041-1|BAA07642.1| 943|Homo sapiens KIAA0088 protein.
Length = 943
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +2
Query: 161 KMKVWA-LVLVAAFVIIGIS-AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 334
+ + WA LVL V +GI+ AVD++ FKTC +S FCKR R +P S Y LDS+
Sbjct: 10 RRRSWASLVLAFLGVCLGITLAVDRSNFKTCEESSFCKRQRSIRPGLSPYRALLDSL--- 66
Query: 335 GNVLSAEVVTIDAADEKRTVLIKTDFERRWKSYSR 439
L + +T+ E VL+ + + K+ +R
Sbjct: 67 --QLGPDSLTVHLIHEVTKVLLVLELQGLQKNMTR 99
>AJ000332-1|CAA04006.1| 944|Homo sapiens Glucosidase II protein.
Length = 944
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +2
Query: 161 KMKVWA-LVLVAAFVIIGIS-AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 334
+ + WA LVL V +GI+ AVD++ FKTC +S FCKR R +P S Y LDS+
Sbjct: 11 RRRSWASLVLAFLGVCLGITLAVDRSNFKTCEESSFCKRQRSIRPGLSPYRALLDSL--- 67
Query: 335 GNVLSAEVVTIDAADEKRTVLIKTDFERRWKSYSR 439
L + +T+ E VL+ + + K+ +R
Sbjct: 68 --QLGPDSLTVHLIHEVTKVLLVLELQGLQKNMTR 100
>AF144074-1|AAF66685.1| 966|Homo sapiens glucosidase II alpha
subunit protein.
Length = 966
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +2
Query: 161 KMKVWA-LVLVAAFVIIGIS-AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSILVH 334
+ + WA LVL V +GI+ AVD++ FKTC +S FCKR R +P S Y LDS+
Sbjct: 11 RRRSWASLVLAFLGVCLGITLAVDRSNFKTCEESSFCKRQRSIRPGLSPYRALLDSL--- 67
Query: 335 GNVLSAEVVTIDAADEKRTVLIKTDFERRWKSYSR 439
L + +T+ E VL+ + + K+ +R
Sbjct: 68 --QLGPDSLTVHLIHEVTKVLLVLELQGLQKNMTR 100
>BC112051-1|AAI12052.1| 914|Homo sapiens glucosidase, alpha;
neutral C protein.
Length = 914
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 218 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSI 325
AVDKN F+ C++ F +R + + +KS Y LDS+
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSV 50
>AF545046-1|AAN74757.1| 914|Homo sapiens neutral alpha-glucosidase
C type 3 protein.
Length = 914
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 218 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSI 325
AVDKN F+ C++ F +R + + +KS Y LDS+
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSV 50
>AF545045-1|AAN74756.1| 914|Homo sapiens neutral alpha glucosidase
C type 2 protein.
Length = 914
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 218 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSI 325
AVDKN F+ C++ F +R + + +KS Y LDS+
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSV 50
>BC093833-1|AAH93833.1| 914|Homo sapiens glucosidase, alpha;
neutral C protein.
Length = 914
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 218 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSI 325
AVDKN F+ C++ F +R + + +KS Y LDS+
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYRALLDSV 50
>BC059406-1|AAH59406.1| 914|Homo sapiens glucosidase, alpha;
neutral C protein.
Length = 914
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 218 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSI 325
AVDKN F+ C++ F +R + + +KS Y LDS+
Sbjct: 15 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYRALLDSV 50
>AK074037-1|BAB84863.1| 925|Homo sapiens FLJ00088 protein protein.
Length = 925
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 218 AVDKNKFKTCSQSGFCKRLRPFKPEKSQYSLNLDSI 325
AVDKN F+ C++ F +R + + +KS Y LDS+
Sbjct: 26 AVDKNIFRDCNKIAFYRRQKQWLSKKSTYRALLDSV 61
>AF153208-1|AAD34617.1| 247|Homo sapiens GC-rich sequence
DNA-binding factor candidate protein.
Length = 247
Score = 29.9 bits (64), Expect = 8.6
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 414 KDDGKVILVNTQGHKVIITSEPLKLEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDED 593
KDD V L+ T KVI+ + L+ ++ V N+N+Q+ ++ L R + D+D
Sbjct: 120 KDDVDVALLPTIVEKVILPKLTVILKLINGYPSVVNAENKNTQVYLKALLLRMRRTLDDD 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,125,000
Number of Sequences: 237096
Number of extensions: 1759383
Number of successful extensions: 7953
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7951
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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