Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d22
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    42   4e-06
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.4  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   6.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   8.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 41.9 bits (94), Expect = 4e-06
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = +2

Query: 383 SYLRQLLEGVAYCHAQRVLHRDLKPQNLLIDEEGHIKLADFGLAR 517
           S  RQ+  G+ +    RV+HRDL  +N+L+ E   +K++DFGL+R
Sbjct: 596 SIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSR 640



 Score = 32.3 bits (70), Expect = 0.003
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
 Frame = +2

Query: 92  IGEGTYGVVYKA-----KDRVTGQEIALKKIKLENEPEGVPSTALREISVLRELR-HPAV 253
           IGEG +G+V +A     +D  T  ++A+K +K     E +     +EI++++ +R HP +
Sbjct: 457 IGEGAFGIVRRAFLDLKEDNKT--QVAVKMLKESPTSEEIRQFT-QEINIMKSVRQHPYI 513

Query: 254 VRLLDVMLASSDSKLFLVFEY 316
           V L+  +         LV EY
Sbjct: 514 VSLIGCVTEGRAEGPLLVVEY 534


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -2

Query: 256 YNC-WMSKFSQH*DLP*GC*WYTLRFIFKFDFLQRDFLS 143
           +NC W+ K   +  L  G    T+ F+F F F+   FLS
Sbjct: 367 FNCFWVMKLLYN-VLRFGAESQTINFMFSFGFILLRFLS 404


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 180 MNLRVYHQQPYG 215
           MN+  YH  PYG
Sbjct: 284 MNIVPYHMSPYG 295


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 180 MNLRVYHQQPYG 215
           MN+  YH  PYG
Sbjct: 284 MNIVPYHMSPYG 295


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 180 MNLRVYHQQPYG 215
           MN+  YH  PYG
Sbjct: 284 MNIVPYHMSPYG 295


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 180 MNLRVYHQQPYG 215
           MN+  YH  PYG
Sbjct: 240 MNIVPYHMSPYG 251


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 180 MNLRVYHQQPYG 215
           MN+  YH  PYG
Sbjct: 284 MNIVPYHMSPYG 295


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 180 MNLRVYHQQPYG 215
           MN+  YH  PYG
Sbjct: 72  MNIVPYHMSPYG 83


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 180 MNLRVYHQQPYG 215
           MN+  YH  PYG
Sbjct: 284 MNIVPYHMSPYG 295


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 412 CVLSRPTCSPQRPE 453
           C++ R TCSP   E
Sbjct: 49  CLMERGTCSPDGEE 62


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 177 KMNLRVYHQQPYGRSQCCENFDIQQL 254
           KMN  VYH+ P+       N  +Q L
Sbjct: 436 KMNHPVYHKDPHYGFHNVTNTTLQNL 461


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,135
Number of Sequences: 336
Number of extensions: 3196
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)