Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d21
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.9  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 385 YLNFNCNILYLVWLFNTICILLC 453
           +L  N +++ L++LFN   I++C
Sbjct: 235 FLISNISLVSLIFLFNCTLIIMC 257


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 388 LNFNCNILYLV--WLFNTICILLCLQKIDFFKQ 480
           L  + NI+ LV  W+F    ++LC Q +  F Q
Sbjct: 193 LKLSINIISLVQLWIFQLYLLILCDQILREFDQ 225


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 359 YHFFPDFFIPP 327
           YH +P+F +PP
Sbjct: 176 YHPYPNFGVPP 186


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 499 KYVNKILA*KNLFSANTTIYILY*TAKLDI 410
           ++V KIL   N F++   I  LY   KL+I
Sbjct: 246 RFVIKILVALNFFTSTLEIDNLYLKHKLEI 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,258
Number of Sequences: 336
Number of extensions: 2533
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)