Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d21
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075574-1|AAL68379.1|  980|Drosophila melanogaster SD04405p pro...    30   2.7  
AE014298-775|AAF46062.3|  980|Drosophila melanogaster CG3160-PA ...    30   2.7  
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro...    29   3.6  

>AY075574-1|AAL68379.1|  980|Drosophila melanogaster SD04405p protein.
          Length = 980

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -1

Query: 304  LPSPWLPEVPSVVLLASVCGLDRLR-PSPWTPSWVLSRVSFCHLHGQTWLYAETLI 140
            LP P L   PS+V+LAS+  L +LR P      W+LS ++F  L G   LY +  I
Sbjct: 898  LPDPSL--YPSIVVLASLSLLLQLRAPQKCQGYWMLS-IAFYILAGVVLLYCQAAI 950


>AE014298-775|AAF46062.3|  980|Drosophila melanogaster CG3160-PA
            protein.
          Length = 980

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -1

Query: 304  LPSPWLPEVPSVVLLASVCGLDRLR-PSPWTPSWVLSRVSFCHLHGQTWLYAETLI 140
            LP P L   PS+V+LAS+  L +LR P      W+LS ++F  L G   LY +  I
Sbjct: 898  LPDPSL--YPSIVVLASLSLLLQLRAPQKCQGYWMLS-IAFYILAGVVLLYCQAAI 950


>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p
           protein.
          Length = 1193

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 572 FNKLKNIVIYVFTNADDIFERYHIKVC*QDSCLKKSI 462
           F +LK +  +   N  D+ E YH KV  +DSCL+  I
Sbjct: 278 FKQLKVMDDWTEVNDYDVEETYHEKVASRDSCLETEI 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,357,037
Number of Sequences: 53049
Number of extensions: 373521
Number of successful extensions: 660
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)