Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10d18
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18297| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_15850| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_31231| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 29 2.3
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 29 2.3
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3) 29 3.1
SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 29 4.1
SB_51787| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9) 28 5.4
SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8) 28 5.4
SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 28 5.4
SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 28 7.1
SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 28 7.1
SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9) 28 7.1
SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035) 28 7.1
SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_58109| Best HMM Match : Methylase_S (HMM E-Value=2.4) 27 9.4
SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30) 27 9.4
SB_51839| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 27 9.4
SB_51640| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.4
SB_46263| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30) 27 9.4
SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_26855| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9) 27 9.4
SB_1034| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30) 27 9.4
SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32) 27 9.4
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_40030| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 27 9.4
SB_37614| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_28146| Best HMM Match : Na_Ca_ex (HMM E-Value=0.039) 27 9.4
>SB_18297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 169 KAKQNGRRLQNVDRRVSSHHQRETERISNQMVR*GNNLHPLG--VCRRHRQG*FLPQRVD 342
+ K +G R+++ + RV SH R N++ GN + G V + RV
Sbjct: 41 RVKSHGNRVKSHENRVKSHENRVKSH-GNRVKSHGNRVKSHGNRVKSHENRVKSHGNRVK 99
Query: 343 SHQNLRPEFKQRVEARPVRIKEHPKK 420
SH+N + RV++ R+K H +
Sbjct: 100 SHENRVKSHENRVKSHENRVKSHENR 125
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 169 KAKQNGRRLQNVDRRVSSHHQRETERISNQMVR*GNNL--HPLGVCRRHRQG*FLPQRVD 342
+ K +G R+++ RV SH R N++ GN + H V + RV
Sbjct: 62 RVKSHGNRVKSHGNRVKSHGNRVKSH-ENRVKSHGNRVKSHENRVKSHENRVKSHENRVK 120
Query: 343 SHQNLRPEFKQRVEARPVRIKEH 411
SH+N RV++ R+K H
Sbjct: 121 SHENRVKSHGNRVKSHGNRVKSH 143
>SB_15850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 499
N+ES H + K+IP N+++RL T S++ +N+ + Y+K L E
Sbjct: 73 NRESNHPPTITKNIPVNINKRLSTLSSDKETFNQAAPPYQKALDE 117
>SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F S Y+K L E
Sbjct: 4 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAASPYQKALDE 48
>SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 499
++ES H + K+IP ++S+RL T S++ +N+ + Y+K L E
Sbjct: 258 HRESNHPPTITKNIPASISKRLSTLSSDKETFNQAAPPYQKALDE 302
>SB_31231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSNE--FFYNEISFYEKVLPE 499
++ES H + K+IP ++RRL+ S++ FF Y+K L +
Sbjct: 101 HRESNHPPSITKNIPAGINRRLSALSSDQAFFDQTAPPYQKALDD 145
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 590 RHGPRRRMRITISGICRTVH 531
RH PR R + T SG+C T+H
Sbjct: 538 RHTPRTRPKFTASGVCITLH 557
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/89 (22%), Positives = 41/89 (46%)
Frame = +2
Query: 227 TNERLNESLTKWFGEETTFTHWEYVGDTGKGDSYLSELIRIKIYGLNSNKESKHVQCVLK 406
T + E+L+K E F+HW + T + + +++ + + S+KE+ H L
Sbjct: 187 TGDECQETLSKSAMEMDAFSHWYFAKKTKWRLTEILQILGTRGFEYISHKETTHRGVPLW 246
Query: 407 SIPKNVSRRLTFRSNEFFYNEISFYEKVL 493
+ V +FR++ F++ Y V+
Sbjct: 247 VVQAKVGCGRSFRADPRFHSCREKYTAVM 275
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H V K+IP ++++RL+ S+ E F + Y+K L E
Sbjct: 942 HRESNHPPTVTKNIPASINKRLSTLSSDKETFEHAAPPYQKALDE 986
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 438 RSAAMSSSITRSVSTRKSYLNYQSSEPQKAPMNRSTNARNCYSHTSTGSMT 590
R+A + S RS RK+YL Y+S+ + + R AR + ++T
Sbjct: 2388 RAARLIQSYYRSCVARKAYLRYRSACVRMQALVRGKQAREAFMELKMATVT 2438
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 499
++ES H + K+IP ++++RL T S++ +N+ + Y+K L E
Sbjct: 1283 HRESNHPPTITKNIPASINKRLSTLSSDKETFNQAAPPYQKALDE 1327
>SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3)
Length = 466
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 499
++ES H + K+IP ++++RL T S++ +N+ + Y+K L E
Sbjct: 389 HRESNHPPTITKNIPASINKRLSTLSSDKETFNQAAPPYQKALDE 433
>SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 499
++ES H + K+IP ++++RL T S+E +++ + Y+K L E
Sbjct: 50 HRESNHQPTITKNIPASINKRLSTLSSDEETFDQAAPPYQKALDE 94
>SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 499
++ES H + K+IP ++++RL T S+E +++ + Y+K L E
Sbjct: 55 HRESNHQPTITKNIPASINKRLSTLSSDEETFDQAAPPYQKALDE 99
>SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 337 HRESNHPSTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 381
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 401 LKSIPKNVSRRLTFRSNEFFYNEISFYEKVLPELSKFRASKSANEPFDKCPK 556
+ S+PK + TF+ N+ +NE+ + + +++ A K + E +D+ K
Sbjct: 578 MPSVPK--FHQATFQPNKMTFNELGQFRSEMKNMTQKLAEKRSKEDYDRTVK 627
>SB_51787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 81 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 125
>SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 153 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQATPPYQKALDE 197
>SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 48 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 92
>SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 101 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 145
>SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9)
Length = 285
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 153 HRESSHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 197
>SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 55 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 99
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 177 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 221
>SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8)
Length = 243
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 172 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 216
>SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 48 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 92
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 181 HRESNHQPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 225
>SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 628
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSNE 454
++ES H ++K+IP ++RRL+ S++
Sbjct: 334 HRESNHPPSIIKNIPAGINRRLSALSSD 361
>SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 671
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSNE 454
++ES H ++K+IP ++RRL+ S++
Sbjct: 420 HRESNHPPSIIKNIPAGINRRLSALSSD 447
>SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRS--NEFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S E F Y+K L E
Sbjct: 68 HRESNHPTTITKNIPASINKRLSTLSADKETFDQAAPPYQKALDE 112
>SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9)
Length = 163
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 101 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYKKALDE 145
>SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 101 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYKKALDE 145
>SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035)
Length = 391
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 77 HRESNHPLTITKNIPTSINKRLSTLSSDKETFDQATPPYQKALDE 121
>SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 194 FKTLTGVSPLITNERLNESLTKWFGEETTFTHWEYVGDTGKG 319
F L+ P+ + RL+ESL + FG T H + + G G
Sbjct: 65 FSQLSTSRPIASISRLHESLKRSFGRPTGLDHDNIITNMGGG 106
>SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 374 KESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 499
+ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 62 RESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 105
>SB_58109| Best HMM Match : Methylase_S (HMM E-Value=2.4)
Length = 228
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 148 NKSNNSNFCFQQLSTNSVQSFLEKLN 173
>SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30)
Length = 575
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 225 NKSNNSNFCFQQLSTNSVQSFLEKLN 250
>SB_51839| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 337
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 180 NKSNNSNFCFQQLSTNSVQSFLEKLN 205
>SB_51640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 880
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 416 NKSNNSNFCFQQLSTNSVQSFLEKLN 441
>SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1273
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 371 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVL 493
++ES H + K+IP ++++RL+ S+ E F Y+K L
Sbjct: 1146 HRESNHPPTITKNIPASINKRLSTLSSDKEIFDQAAPPYQKAL 1188
>SB_46263| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)
Length = 490
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 31 NKSNNSNFCFQQLSTNSVQSFLEKLN 56
>SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1800
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 1666 NKSNNSNFCFQQLSTNSVQSFLEKLN 1691
>SB_26855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 128 NKSNNSNFCFQQLSTNSVQSFLEKLN 153
>SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9)
Length = 324
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 225 NKSNNSNFCFQQLSTNSVQSFLEKLN 250
>SB_1034| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)
Length = 558
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 31 NKSNNSNFCFQQLSTNSVQSFLEKLN 56
>SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)
Length = 775
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 420 NKSNNSNFCFQQLSTNSVQSFLEKLN 445
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 1297 NKSNNSNFCFQQLSTNSVQSFLEKLN 1322
>SB_40030| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
Length = 268
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 31 NKSNNSNFCFQQLSTNSVQSFLEKLN 56
>SB_37614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 31 NKSNNSNFCFQQLSTNSVQSFLEKLN 56
>SB_28146| Best HMM Match : Na_Ca_ex (HMM E-Value=0.039)
Length = 751
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 534 NRSTNARNCYSHTSTGSMTSFVWKTN 611
N+S N+ C+ ST S+ SF+ K N
Sbjct: 249 NKSNNSNFCFQQLSTNSVQSFLEKLN 274
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,216,237
Number of Sequences: 59808
Number of extensions: 324912
Number of successful extensions: 1076
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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