Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d16
         (488 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-4|CAI91177.1|  333|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z93387-3|CAB07652.1|  352|Caenorhabditis elegans Hypothetical pr...    28   3.2  
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass...    28   4.2  
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass...    28   4.2  
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass...    28   4.2  
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass...    28   4.2  
U53335-2|AAU87823.1|  190|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z69884-10|CAA93753.1|  400|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z69883-7|CAA93745.1|  400|Caenorhabditis elegans Hypothetical pr...    27   7.3  
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr...    27   7.3  
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z93387-4|CAI91177.1|  333|Caenorhabditis elegans Hypothetical
           protein T02E9.2b protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 105 RRRPSHRAHATPATCWGGRVARGYPG 28
           ++ P+   H  PA C GG + +GY G
Sbjct: 30  QQAPACAPHPAPAPCSGGNIVQGYVG 55


>Z93387-3|CAB07652.1|  352|Caenorhabditis elegans Hypothetical
           protein T02E9.2a protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 105 RRRPSHRAHATPATCWGGRVARGYPG 28
           ++ P+   H  PA C GG + +GY G
Sbjct: 30  QQAPACAPHPAPAPCSGGNIVQGYVG 55


>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 308, isoform d protein.
          Length = 1379

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 21/59 (35%), Positives = 25/59 (42%)
 Frame = -3

Query: 189 YARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLR 13
           Y RLS  E+S  V S   P+  P  V GR+           +C   R  R  PG  PLR
Sbjct: 234 YKRLSMWETSLNVESDVEPLHTPPLVVGRKLDYIDKEGNNPSCCRERGTR-KPGFRPLR 291


>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 308, isoform b protein.
          Length = 4034

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 21/59 (35%), Positives = 25/59 (42%)
 Frame = -3

Query: 189 YARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLR 13
           Y RLS  E+S  V S   P+  P  V GR+           +C   R  R  PG  PLR
Sbjct: 234 YKRLSMWETSLNVESDVEPLHTPPLVVGRKLDYIDKEGNNPSCCRERGTR-KPGFRPLR 291


>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 308, isoform a protein.
          Length = 1633

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 21/59 (35%), Positives = 25/59 (42%)
 Frame = -3

Query: 189 YARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLR 13
           Y RLS  E+S  V S   P+  P  V GR+           +C   R  R  PG  PLR
Sbjct: 234 YKRLSMWETSLNVESDVEPLHTPPLVVGRKLDYIDKEGNNPSCCRERGTR-KPGFRPLR 291


>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 308, isoform c protein.
          Length = 7548

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 21/59 (35%), Positives = 25/59 (42%)
 Frame = -3

Query: 189 YARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLR 13
           Y RLS  E+S  V S   P+  P  V GR+           +C   R  R  PG  PLR
Sbjct: 234 YKRLSMWETSLNVESDVEPLHTPPLVVGRKLDYIDKEGNNPSCCRERGTR-KPGFRPLR 291


>U53335-2|AAU87823.1|  190|Caenorhabditis elegans Hypothetical
          protein C55C3.7 protein.
          Length = 190

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 1  GTRAAQRDCARVPACNATAPT 63
          GT    RDC   P CN T P+
Sbjct: 7  GTLFQTRDCISAPVCNCTGPS 27


>Z69884-10|CAA93753.1|  400|Caenorhabditis elegans Hypothetical
           protein C27C12.3 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = -3

Query: 261 LTFIYVNSSFTT*SRVQNKVPHYGYARLSGRE----SSRRVTSVARPVQRPSDVAGRRRP 94
           L  ++   S    +  +N +      +LSG+     S+ RV  VAR     SD++  +  
Sbjct: 180 LNKLFAGCSIEEIASAENNMSFGNSRKLSGKSVNVRSNHRVLEVARETMNSSDISPNKNT 239

Query: 93  SH-RAHATPATCWGGRVARGYPGTVPLR 13
           S      +P+T W    +   P ++ +R
Sbjct: 240 SSVLLDGSPSTIWPPSDSLELPRSIQMR 267


>Z69883-7|CAA93745.1|  400|Caenorhabditis elegans Hypothetical
           protein C27C12.3 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = -3

Query: 261 LTFIYVNSSFTT*SRVQNKVPHYGYARLSGRE----SSRRVTSVARPVQRPSDVAGRRRP 94
           L  ++   S    +  +N +      +LSG+     S+ RV  VAR     SD++  +  
Sbjct: 180 LNKLFAGCSIEEIASAENNMSFGNSRKLSGKSVNVRSNHRVLEVARETMNSSDISPNKNT 239

Query: 93  SH-RAHATPATCWGGRVARGYPGTVPLR 13
           S      +P+T W    +   P ++ +R
Sbjct: 240 SSVLLDGSPSTIWPPSDSLELPRSIQMR 267


>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
           protein ZK688.5b protein.
          Length = 1595

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -3

Query: 285 HQVILLVVLTFIYVNSSFTT*SRVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAG 106
           HQ+  +  LT   ++ SF T S  Q  +P Y +     +  +  VT +  P +  SDV G
Sbjct: 456 HQISHMTHLT-ADLDVSFITPSFPQRILPQYAFQSSDEQPLTIPVTHIFEPPRMLSDVGG 514

Query: 105 R 103
           R
Sbjct: 515 R 515


>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
           protein ZK688.5a protein.
          Length = 1620

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -3

Query: 285 HQVILLVVLTFIYVNSSFTT*SRVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAG 106
           HQ+  +  LT   ++ SF T S  Q  +P Y +     +  +  VT +  P +  SDV G
Sbjct: 456 HQISHMTHLT-ADLDVSFITPSFPQRILPQYAFQSSDEQPLTIPVTHIFEPPRMLSDVGG 514

Query: 105 R 103
           R
Sbjct: 515 R 515


>Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical
           protein F15B9.10 protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 30  QGTRVQRDRPNMWLGSRGPGATAGG 104
           QG+  Q DR N   G +GPG+ +GG
Sbjct: 184 QGSPRQPDRGNQGPGYQGPGSGSGG 208


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
 Frame = +2

Query: 17  SGTVPGYPRATRPPQHVAGVAWARCDGRRRPATSLGLWTGRA--------TDVTRLDDSR 172
           S +VP   R   P  H    A  R DG+R P+ S      RA        +D    DD R
Sbjct: 623 SASVPFQRRMNSPQTHATSYA-RRSDGKRHPSKSRSSRDDRANRRDRDRDSDGRCGDDRR 681

Query: 173 PDKRAYP 193
            D R++P
Sbjct: 682 RDHRSHP 688


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,751,146
Number of Sequences: 27780
Number of extensions: 198826
Number of successful extensions: 493
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)