Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10d14
(420 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1070 - 25814741-25815850 33 0.093
01_06_0619 - 30650665-30651138 33 0.12
05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519 31 0.38
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 31 0.38
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 31 0.50
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270... 29 1.5
02_01_0148 - 1051121-1051192,1051378-1051512,1052343-1052396,105... 29 1.5
03_05_1070 + 30125131-30127029 29 2.0
07_03_1386 - 26192019-26192073,26192272-26192397,26192570-261926... 28 2.7
07_01_0974 + 8211602-8212051 28 3.5
05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269... 28 3.5
03_06_0083 - 31532213-31532775,31534016-31534043 28 3.5
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 27 4.6
10_06_0055 + 10129846-10129869,10130238-10130330 27 6.1
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 27 6.1
04_04_0069 + 22506885-22508354 27 6.1
03_05_0996 - 29547974-29547977,29548442-29548620,29548827-295489... 27 6.1
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 27 6.1
08_02_0137 - 13049872-13050893,13051022-13051175 27 8.1
04_03_0141 + 11767781-11767880,11767953-11769262 27 8.1
03_04_0243 + 19298293-19299117 27 8.1
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609... 27 8.1
>12_02_1070 - 25814741-25815850
Length = 369
Score = 33.1 bits (72), Expect = 0.093
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -2
Query: 230 PRPGLGDPHAPIPPLVPCNRPGTTRHSCLSPRCPSSWSPH*PSIRCS 90
P P L P P VP + P TT+H L+P PS+ P IR S
Sbjct: 187 PEPSLSLPLLREPVSVPADEPDTTKHDKLTPPSPSTQQLP-PKIRLS 232
>01_06_0619 - 30650665-30651138
Length = 157
Score = 32.7 bits (71), Expect = 0.12
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -2
Query: 236 VSPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSPRCPSSWSPH*PSIRCSFEPMTANSRVL 57
V P P GD P PGT + + R +S PH PS EP A +R L
Sbjct: 26 VEPHPSGGDVQIGSREATPTVNPGTVKRRAMRSRASASVGPHKPSAPPQREPRRA-ARSL 84
Query: 56 IR 51
R
Sbjct: 85 AR 86
>05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519
Length = 436
Score = 31.1 bits (67), Expect = 0.38
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -2
Query: 209 PHAPIPPLVPCNRPGT---TRHSCLSPRC 132
P +P+PP P + P T + H CLSP C
Sbjct: 355 PSSPVPPRAPTSFPATIFPSPHMCLSPGC 383
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 31.1 bits (67), Expect = 0.38
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 215 LDPAWEKQQKKTFTAWCNSHLRKAG--TGIENIEDDFRNGLKLMLLLEVISGETLPK 379
+D +K W N HL+KAG + N D ++G LL+ ++ E P+
Sbjct: 268 IDEVLSLSPEKMLLRWMNHHLKKAGYKKTVSNFSTDVKDGEAYAYLLKALAPEHSPE 324
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 30.7 bits (66), Expect = 0.50
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSPRCPSSWSP 114
SP PG P A PP P P + S SP PS +P
Sbjct: 1149 SPPPGSSPPPASPPPSTPSAPPTNSSGSAPSPPSPSQSAP 1188
>04_04_1093 +
30825722-30826168,30826457-30826608,30826926-30827048,
30827240-30827384,30828032-30828093,30828373-30828586,
30829671-30830585,30830827-30831076,30831164-30831432
Length = 858
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 203 APIPPLVPCNRPGTTRHSCLSPRCPSSWSPH*PSIRCSFEPMTANSRVLIRTAHCNRQPA 24
AP PP P + P RHS + P S H PS + P ++S +A + +P
Sbjct: 6 APPPPSSPPSSPPPLRHSPAALGTPRSRRRHSPSPSLALTP--SSSASASASASTSSRPK 63
Query: 23 ARP 15
RP
Sbjct: 64 VRP 66
>02_01_0148 -
1051121-1051192,1051378-1051512,1052343-1052396,
1052501-1052581,1052667-1052826,1053346-1053453,
1053543-1053718,1053952-1054002,1054154-1054264,
1054493-1054547,1055667-1055789,1055922-1056007,
1056235-1056349,1056429-1056667
Length = 521
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 208 GSPRPGLGETTEKDIHGMVQQSPQKSWHRHREHRGRLPQWLKAHAAAGGHLRRDS 372
G + GL T KD H + + QK WHR R Q L+ +R D+
Sbjct: 449 GVVQKGLRPTIPKDTHPKLSELLQKCWHRDPAERPDFSQILEILQRLPKEVRADT 503
>03_05_1070 + 30125131-30127029
Length = 632
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 120 VTALTVDSMFVRAYDRELACVDSYRALQQAAGRSPAA 10
V L +DSM R D E C RA+++ GRS AA
Sbjct: 540 VLRLDMDSMRNRVQDLERECSSMRRAIKKIDGRSAAA 576
>07_03_1386 -
26192019-26192073,26192272-26192397,26192570-26192622,
26192722-26192807,26192896-26193017,26193096-26193155,
26193787-26193866,26193949-26194087,26194273-26194367,
26194792-26194860,26195015-26195131,26195839-26195913,
26196590-26196961
Length = 482
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 181 GTRGGMGA*GSPRPGLGETTEKDIHGMVQQSPQKSWHRHREHRGRLPQWLKAHAA 345
G RGG G G D G+V ++ WH H+ G + + L+ AA
Sbjct: 26 GGRGGGGGGAGSSGSSGARRRFDDKGLVARTSLILWHTHQNDAGAVRKLLEEDAA 80
>07_01_0974 + 8211602-8212051
Length = 149
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 221 GLGDPHAPIPPLVPCNRPGTTRHSCLSP 138
G P P PP VPCN TT + SP
Sbjct: 65 GPSPPTNPAPPAVPCNCGTTTAPAAPSP 92
>05_04_0272 +
19624898-19625071,19625909-19626370,19626471-19626905,
19626992-19627237,19627318-19628085,19628245-19628417,
19629337-19629440,19629525-19630127,19630210-19630214
Length = 989
Score = 27.9 bits (59), Expect = 3.5
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +2
Query: 269 SHLRKAGTGIENIEDDFR-----NGLKLMLLLEVISGETLPKPDRGKMRFXKIAN 418
+H KAG I D R NGL+ LLLE I+ + P ++ K+AN
Sbjct: 773 AHGSKAGFPISGFYSDMRKMQNMNGLEGQLLLEPITNDLQPMEKCNSVQSPKVAN 827
>03_06_0083 - 31532213-31532775,31534016-31534043
Length = 196
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 274 PQKSWHRHREHRGRLPQWLKAHAAAGGHLRR 366
P W RH RG QW+K A GG RR
Sbjct: 158 PDLEWWRHGGDRG---QWVKEAATVGGGRRR 185
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 27.5 bits (58), Expect = 4.6
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRP--GTTRHSCLSPRCPSSW--SPH*PSIRCSFEPMTANS 66
SP P P P PP P +P T + SP P+ P PS++ S P T S
Sbjct: 584 SPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTS--PPTPQS 641
Query: 65 RVLIRT 48
+LI T
Sbjct: 642 ALLIST 647
>10_06_0055 + 10129846-10129869,10130238-10130330
Length = 38
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 28 GCLLQCAVRINTREFAVIGSNEHRID 105
GCL+ C + N REF + N ++D
Sbjct: 2 GCLIFCQIPDNLREFLMCDQNHLKVD 27
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 418 VSDFVESHFATVGLGQSLAGDDL 350
+++ E H A VG GQ+L GDD+
Sbjct: 221 IAEAAELHDAVVGRGQALHGDDV 243
>04_04_0069 + 22506885-22508354
Length = 489
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 256 GMVQQSPQKSWHRHREHRGRLPQW---LKAHAAAGGHLRRDSAQAR 384
G+ ++ +++W RH E R R +W A A AGG RDS R
Sbjct: 263 GVGRRRRRRTWRRHGEGRQRSGRWQWRRLAEAVAGG---RDSGHRR 305
>03_05_0996 -
29547974-29547977,29548442-29548620,29548827-29548905,
29549556-29549577,29550370-29550439,29550589-29550667,
29551252-29551268,29552214-29552295,29553540-29553630,
29554354-29554498,29554653-29554964
Length = 359
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = -2
Query: 203 APIPPLVPC-----NRPGTTRHSCLSPRCPSSWSPH*PSIRC 93
+P+P L+ C NRP T R S CP S P ++RC
Sbjct: 29 SPLPSLIQCRRRLTNRPATVRLSPAPSPCPMS-PPPLNTVRC 69
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 245 KTFTAWCNSHLRKAG--TGIENIEDDFRNGLKLMLLLEVISGE 367
K W N HL+KAG + N D ++G LL ++ E
Sbjct: 277 KMLLKWMNFHLKKAGYKKTVTNFSTDVKDGEAYAYLLNTLAPE 319
>08_02_0137 - 13049872-13050893,13051022-13051175
Length = 391
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 256 GMVQQSPQKSWHRHREHRGRLPQWLKA-HAAAGGHLRRDSAQARPWQ 393
G +P + + E G P+W +A H GG R+++++ R WQ
Sbjct: 309 GPTSSTPMQMYEDDWEPTGYAPRWTQAPHHNTGGSPRQNTSENR-WQ 354
>04_03_0141 + 11767781-11767880,11767953-11769262
Length = 469
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 230 PRPGLGDPHAPIPPLVPCNRPGTTRHSCLSPRCPSSWSPH 111
PR LG PHA P P + PG + S P P ++P+
Sbjct: 328 PRLQLGAPHA--PRAAPSSHPGASSSSARPP--PPGYNPN 363
>03_04_0243 + 19298293-19299117
Length = 274
Score = 26.6 bits (56), Expect = 8.1
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -2
Query: 248 SFSVVSPRPGLGDPHAP--IPPLVPCNR--PGTTRHSCLSPRCPSSWSP 114
S+S S P P +P + C+R P T R + L PR P W P
Sbjct: 193 SWSRTSAPPASSSPTSPRRARSSLTCSRVAPSTPRSATLLPRQPRRWRP 241
>01_03_0050 +
11959421-11959736,11959892-11959960,11960641-11960979,
11961090-11961152,11962472-11962962,11963773-11964441
Length = 648
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 90 VRAYDRELACVDSYRALQQAAGRSPAAR 7
V YDRELA ++ + LQQA + +R
Sbjct: 171 VSKYDRELALINKGKELQQAVNMTNGSR 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,245,886
Number of Sequences: 37544
Number of extensions: 236618
Number of successful extensions: 1032
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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