Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10d14
(420 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40303| Best HMM Match : CH (HMM E-Value=5.1e-10) 60 7e-10
SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 7e-10
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 5e-09
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 50 8e-07
SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 30 0.68
SB_5386| Best HMM Match : GRP (HMM E-Value=0.012) 29 1.2
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_8941| Best HMM Match : VWA (HMM E-Value=0) 28 3.6
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 28 3.6
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_48827| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_53568| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.61) 27 8.3
SB_49129| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_43150| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_40303| Best HMM Match : CH (HMM E-Value=5.1e-10)
Length = 82
Score = 60.1 bits (139), Expect = 7e-10
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +2
Query: 230 EKQQKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL 373
E+ QKKTFT W NSHL++ G + + D ++G KL+LLLEV+SGE L
Sbjct: 4 ERVQKKTFTKWINSHLQRVGARVNELYHDLQDGRKLILLLEVLSGEKL 51
>SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 60.1 bits (139), Expect = 7e-10
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +2
Query: 230 EKQQKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL 373
E+ QKKTFT W NSHL++ G + + D ++G KL+LLLEV+SGE L
Sbjct: 40 ERVQKKTFTKWINSHLQRVGARVNELYHDLQDGRKLILLLEVLSGEKL 87
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +2
Query: 218 DPAWEKQQKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPK 379
D W+K Q+ TFT WCN HL+ + ++E D +GLKL+ LL+V+S + LP+
Sbjct: 367 DAEWKKIQQNTFTRWCNEHLKCVKQFVYSLETDLCDGLKLIALLQVLSQKRLPR 420
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +2
Query: 239 QKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFXKIAN 418
QKKTFT W N+ L K G I ++ ++ R+G L+LLLEV+ LP+ +RG +RF + N
Sbjct: 39 QKKTFTKWVNNRLLKVGVRILDLYEELRDGENLLLLLEVLCNVKLPR-ERGLLRFHMLQN 97
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 50.0 bits (114), Expect = 8e-07
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +2
Query: 230 EKQQKKTFTAWCNSHLRKAGTGIE--NIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRF 403
E QKKTFT W N L +AG + ++ +D ++G L+ LLEV++G+ + K +RG MR
Sbjct: 24 EGTQKKTFTKWINIQLSRAGNNVRVGDLFNDLKDGTILIALLEVLTGKKI-KRERGNMRL 82
Query: 404 XKIAN 418
+ N
Sbjct: 83 HHLNN 87
>SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 239 QKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL 373
QKKTFT W NS L K+G + ++ +D +G L+ LLE+ISGE +
Sbjct: 52 QKKTFTKWVNSFLDKSGLHVNDLFEDLADGKILISLLEIISGEKI 96
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 227 WEKQQKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVIS 361
W + QK TFT WCN +R++G I ++ F +G+ ++ L+E ++
Sbjct: 38 WIEIQKNTFTNWCNEQIRESGIVITDLAIAFNDGVTIVYLVESVA 82
>SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 218 DPAWEKQQKKTFTAWCNSHLRK--AGTGIENIEDDFRNGLKLMLLLEVISGETL 373
D + ++Q + +TAW NS L+K I+N+ D ++G+ + L+EV++GE+L
Sbjct: 122 DLSRREEQLQAYTAWVNSQLKKRPGSRVIQNLPIDMKDGVAFIQLIEVVAGESL 175
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 30.3 bits (65), Expect = 0.68
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 206 HAPIPPLVPCNRPGTTRHSCLSPRCPSSWSP-H*P--SIRCSFEPMTA 72
H+P+ + PC+ P T H C SP P++ P H P ++R P TA
Sbjct: 95 HSPLTAVHPCHSPPTAVHPCHSP--PNTVRPCHSPPTAVRPCHSPPTA 140
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -2
Query: 206 HAPIPPLVPCNRPGTTRHSCLSPRCPSSWSP-H*P--SIRCSFEPMTA 72
H+P + PC+ P T H C SP P++ P H P ++R P TA
Sbjct: 245 HSPPNTVHPCHSPPNTVHPCFSP--PNTVRPCHSPPNTVRPCHSPPTA 290
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -2
Query: 206 HAPIPPLVPCNRPGTTRHSCLSPRCPSSWSP-H*P--SIRCSFEPMTA 72
H+P + PC+ P T H C SP P++ P H P ++R P TA
Sbjct: 15 HSPPTAVHPCHSPPNTVHPCHSP--PNTVRPCHSPPNTVRPCHSPPTA 60
Score = 28.3 bits (60), Expect = 2.7
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSPRCPSSWSP-H*P--SIRCSFEPMTA 72
SP + H+P + PC+ P T H C SP P++ P H P ++R P TA
Sbjct: 76 SPPTAVHPCHSPPNTVRPCHSPLTAVHPCHSP--PTAVHPCHSPPNTVRPCHSPPTA 130
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSP 138
SP + H+P + PC+ P T H C SP
Sbjct: 56 SPPTAVHPCHSPPTAVRPCHSPPTAVHPCHSP 87
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSP 138
SP + H+P + PC+ P T H C SP
Sbjct: 196 SPLTAVRPCHSPPNTVRPCHSPPTAVHPCHSP 227
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSP 138
SP + H+P + PC+ P T H C SP
Sbjct: 226 SPLTAVRPCHSPPNTVRPCHSPPNTVHPCHSP 257
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -2
Query: 206 HAPIPPLVPCNRPGTTRHSCLSPRCPSSWSP-H*P--SIRCSFEPMTA 72
H+P + PC+ P T C SP P++ P H P ++R P+TA
Sbjct: 55 HSPPTAVHPCHSPPTAVRPCHSP--PTAVHPCHSPPNTVRPCHSPLTA 100
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSP 138
SP + H+P+ + PC+ P T C SP
Sbjct: 186 SPLTAVHPCHSPLTAVRPCHSPPNTVRPCHSP 217
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 233 SPRPGLGDPHAPIPPLVPCNRPGTTRHSCLSP 138
SP + H+P+ + PC+ P T C SP
Sbjct: 216 SPPTAVHPCHSPLTAVRPCHSPPNTVRPCHSP 247
>SB_5386| Best HMM Match : GRP (HMM E-Value=0.012)
Length = 800
Score = 29.5 bits (63), Expect = 1.2
Identities = 29/82 (35%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +1
Query: 25 AGCLLQCAVRI----NTREFAVIGSNEHRIDGQCGDHDDGQRGDKQL*RVVPGRLHGTRG 192
AGC L +R N F + S +DG GDH DG G PG G G
Sbjct: 294 AGCCLAMGMRFAGSANQEAFTCLVSALCSVDGGDGDHGDGDHGGGDPGGGDPG--GGDPG 351
Query: 193 GMGA*GSPRPGLGETTEKDIHG 258
G G G PG G+ D HG
Sbjct: 352 G-GDPGGGDPGGGDHGGGD-HG 371
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -2
Query: 182 PCNRPGTTRHSCLSPRCPSSWSPH*PSIRCSFEPMTANSRVLIRTAHCNR 33
PC + C CPS+WS CS ++ S V +RT C +
Sbjct: 881 PCKGANMSAMVCYQRACPSTWSSWSNWTSCS---VSCGSGVQVRTRSCEK 927
>SB_8941| Best HMM Match : VWA (HMM E-Value=0)
Length = 2180
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Frame = -2
Query: 212 DPHAPIPP----LVPCNR----PGTTRHSCLSPRCPSSWSPH*PSIRCSFEPMTANSRVL 57
DP P PP L+P N G S RC S WS H ++ C+ + +
Sbjct: 709 DPRRPAPPGHIVLMPTNDIAHDEGFASTGTRSVRCHSRWSTHGLTLTCNLLDPCSIGYMT 768
Query: 56 IRTAH 42
+ T+H
Sbjct: 769 VTTSH 773
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.9 bits (59), Expect = 3.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 265 QQSPQKSWHRHREHRGRLPQWLKAHAAAGGHLRRDSAQARPWQNAI 402
QQ P + HR H L Q LKA L RD A+ R +Q A+
Sbjct: 100 QQPPASAKHREAIHI--LEQDLKAKTNRVKELERDHAKCRDYQKAV 143
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 27.9 bits (59), Expect = 3.6
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 85 SNEHRIDGQCG-DHDDGQRGDKQL*RVVPGRLHGTRGGMGA*GSPRPGLGETTEKDIHGM 261
S EH Q G D DD + G K R ++GG SP P + ++D
Sbjct: 1560 SQEHSRKSQRGRDKDDRESGAKSR-RERQSSARKSKGGAHGATSPPPTVAPQVDEDKTDG 1618
Query: 262 VQQSPQKSWHR 294
Q +PQ + HR
Sbjct: 1619 PQTAPQLASHR 1629
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 27.5 bits (58), Expect = 4.8
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = -2
Query: 224 PGLGDPHAP---IPPL----VPCNRPGTTRHSCLSPRCPSSWSPH*PSIRCSFEPMTANS 66
PGLG+PH P PPL P P T + S + P + P+++ E M ++S
Sbjct: 883 PGLGEPHGPGNGQPPLEAFGQPLLPPQTGQQSAM-PALQTGQQSAMPALQAGLEAMMSDS 941
Query: 65 RVLIRTAHCNRQPAARPLQED 3
+ + N+ P P E+
Sbjct: 942 SIPDKPITANK-PLKIPKPEE 961
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +1
Query: 265 QQSPQKSWHRHREHRGRLPQWLKAHAAAGGHLRRDSAQARPWQNA 399
Q++ + WHR+ H Q + H + L RD Q+ + A
Sbjct: 74 QETQVQKWHRNASHNSTSWQNINIHESLAKELARDEMQSNERRRA 118
>SB_48827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 332 KLMLLLEVISGETLPKP 382
K +L+++VISG+ LPKP
Sbjct: 625 KKLLIIQVISGQQLPKP 641
>SB_53568| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.61)
Length = 375
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 289 HRHREHRGRLPQWLK 333
H HR H RLP++LK
Sbjct: 232 HHHRHHHRRLPEYLK 246
>SB_49129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 212 DPHA-PIPPLVPCNRPGTTRHSCL 144
D HA P+PP+ GT RH CL
Sbjct: 29 DQHARPLPPIGVEESQGTRRHKCL 52
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 242 SVVSPRPGLGDPHAPIPPLVPCNRP 168
SVV + G P+ +PP PC P
Sbjct: 3087 SVVKSKMTHGTPYKAVPPSTPCQNP 3111
>SB_43150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 616
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 227 WEKQQKKTFTAWCNSHLRKAGTGIENIEDDF 319
W+K ++K FT+ HL T EN++ F
Sbjct: 204 WKKPEEKNFTSISTKHLLPFFTNDENMDGKF 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,398,982
Number of Sequences: 59808
Number of extensions: 240887
Number of successful extensions: 878
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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