Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d14
         (420 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   0.84 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   1.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    22   7.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 0.84
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +1

Query: 220 PGLGETTEKDIHGMVQQSPQKSWHRHREHRGRLPQWLKAHAAAGGH 357
           P +    E+D   ++QQ  Q+  H+H +      Q    H + G H
Sbjct: 624 PNIFSEDEEDQQHLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGTH 669


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 257 P*MSFSVVSPRPGLGDPHAPIPP 189
           P  S + ++P PG+G P +P+ P
Sbjct: 445 PDRSPATLTPSPGIGGPISPLDP 467


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 226 LGETTEKDIHGMVQQSPQKSWHRHREHRGRLPQWLKA 336
           LG   +   H    Q  Q+ +HR      R P+W +A
Sbjct: 211 LGNGIQLHRHQHQLQPQQRRFHRQSPAHRRKPRWRRA 247


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 118 DHDDGQRGDKQL*RVVPGRLHGTRGGM 198
           DH D   GD+ L   +  R H  R G+
Sbjct: 473 DHPDNIDGDRMLRLAMASRHHHHRAGL 499


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,863
Number of Sequences: 2352
Number of extensions: 8517
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)