Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d12
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    33   0.19 
Z78537-4|CAB01721.1|  569|Caenorhabditis elegans Hypothetical pr...    31   0.44 
Z68014-14|CAA92030.1|  569|Caenorhabditis elegans Hypothetical p...    31   0.44 
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF034078-1|AAC02976.1|  815|Caenorhabditis elegans putative E1-E...    29   3.1  

>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = -1

Query: 305 HPSNLSISLRYADEHSTIWPLPDITSFCLANILKAPSFDVK*TIISSENITTARESTLRG 126
           HP N++     AD H  +W   D +S  + ++ +AP  D+     S + I +A + +   
Sbjct: 260 HPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDIS-LNASGDYILSASDDS--- 315

Query: 125 ILLFGDL-SVKVLSK-SVQPFQRLA 57
              F D+ S K L K SV+P  ++A
Sbjct: 316 YWAFSDIRSGKSLCKVSVEPGSQIA 340


>Z78537-4|CAB01721.1|  569|Caenorhabditis elegans Hypothetical
           protein W04G3.8 protein.
          Length = 569

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 427 ILDLHSGALSMGQHFINFYKRSEGKNVFTEKDFTTYKVVKNKIKYSI 567
           +L LHS   S  Q F  +    EGKN F +  +  Y ++ N +KY +
Sbjct: 466 MLQLHSSETSDAQPFWIYKLGPEGKNSFGDSQY-EYAIISNWVKYPV 511


>Z68014-14|CAA92030.1|  569|Caenorhabditis elegans Hypothetical
           protein W04G3.8 protein.
          Length = 569

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 427 ILDLHSGALSMGQHFINFYKRSEGKNVFTEKDFTTYKVVKNKIKYSI 567
           +L LHS   S  Q F  +    EGKN F +  +  Y ++ N +KY +
Sbjct: 466 MLQLHSSETSDAQPFWIYKLGPEGKNSFGDSQY-EYAIISNWVKYPV 511


>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
           protein Y49E10.11b protein.
          Length = 1089

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 25  CPYYIGLWFVPANLWNGCTDFDR 93
           C Y I LWF   + W+G T F+R
Sbjct: 832 CLYIIELWFAMFSAWSGQTIFER 854


>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
           protein Y49E10.11a protein.
          Length = 1139

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 25  CPYYIGLWFVPANLWNGCTDFDR 93
           C Y I LWF   + W+G T F+R
Sbjct: 832 CLYIIELWFAMFSAWSGQTIFER 854


>AF034078-1|AAC02976.1|  815|Caenorhabditis elegans putative E1-E2
           ATPase protein.
          Length = 815

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 25  CPYYIGLWFVPANLWNGCTDFDR 93
           C Y I LWF   + W+G T F+R
Sbjct: 508 CLYIIELWFAMFSAWSGQTIFER 530


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,895,381
Number of Sequences: 27780
Number of extensions: 255913
Number of successful extensions: 671
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)