Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d12
         (572 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein ...    28   5.1  
At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1...    27   6.7  
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1...    27   6.7  

>At4g24630.1 68417.m03527 zinc finger (DHHC type) family protein
           contains Pfam profile PF01529: DHHC zinc finger domain
          Length = 374

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -3

Query: 555 YFVFDNFVSCKILFCEYIFSLGS-FIKIDEMLSH*QSPTVQIKNRGSP 415
           Y  F  FVS   L C YIFS+ + +IKI  ++ H Q  TV    + SP
Sbjct: 178 YRYFFMFVSSSTLLCIYIFSMSAVYIKI--LMDH-QQATVWRAMKESP 222


>At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1)
           (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
           S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
           (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
           {Arabidopsis thaliana}; contains Pfam profiles PF02798:
           Glutathione S-transferase, N-terminal domain and
           PF00043:Glutathione S-transferase, C-terminal domain
          Length = 191

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 49  FVPANLWNGCTDFDRTFTDRSPKSNIPLRVLSRAVVIFSLLIIVY 183
           ++P NL  G   FD  F   +P   +P  V    V+  S  II+Y
Sbjct: 36  YIPVNLLKG-DQFDSDFKKINPMGTVPALVDGDVVINDSFAIIMY 79


>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
           (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
           S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
           (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
           {Arabidopsis thaliana}; contains Pfam profiles PF02798:
           Glutathione S-transferase, N-terminal domain and
           PF00043:Glutathione S-transferase, C-terminal domain
          Length = 221

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 49  FVPANLWNGCTDFDRTFTDRSPKSNIPLRVLSRAVVIFSLLIIVY 183
           ++P NL  G   FD  F   +P   +P  V    V+  S  II+Y
Sbjct: 36  YIPVNLLKG-DQFDSDFKKINPMGTVPALVDGDVVINDSFAIIMY 79


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,905,213
Number of Sequences: 28952
Number of extensions: 229596
Number of successful extensions: 561
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)