Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d11
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.0  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   2.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.9  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 464 VSSSS*NCRTLYTCFLESF 408
           VSSSS NC  L++  ++ F
Sbjct: 232 VSSSSYNCEVLFSFLIDQF 250


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 349 CCRILLLREPLLQQYHC*SP 290
           CCR   LRE  +   HC  P
Sbjct: 83  CCRESFLRERTITLTHCYDP 102


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 416 PRNMYTEFCSFMKRS*HRW 472
           P+ MYT    F++   HRW
Sbjct: 70  PKAMYTVLLEFVQIDPHRW 88


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 470 WFPQCQMVGNLNN*SILVHSITMAMMNMQSS 562
           WF QC +VG +   S L     MA+ ++  S
Sbjct: 232 WFMQCDVVGKVA--SQLAEDFQMALKHVGPS 260


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 11  WRSILTVVILWKKIYKNLI 67
           WR+ L V+    +IYK LI
Sbjct: 537 WRAFLAVLKRRTEIYKGLI 555


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,026
Number of Sequences: 336
Number of extensions: 2928
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)