Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10d09
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3877| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 36 0.024
SB_30477| Best HMM Match : Metallothionein (HMM E-Value=8.3) 36 0.024
SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9) 36 0.024
SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_4661| Best HMM Match : MSSP (HMM E-Value=5.1) 32 0.29
SB_54945| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 0.68
SB_2595| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_23682| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_9505| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_59276| Best HMM Match : TraN (HMM E-Value=4.3) 29 3.6
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11) 29 3.6
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 3.6
SB_11551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_46410| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 28 6.3
SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2) 27 8.4
SB_31029| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_24939| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9) 27 8.4
SB_2784| Best HMM Match : UCR_14kD (HMM E-Value=1.5) 27 8.4
SB_1611| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4) 27 8.4
SB_21069| Best HMM Match : KE2 (HMM E-Value=0.59) 27 8.4
SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9) 27 8.4
SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2) 27 8.4
>SB_3877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Frame = +3
Query: 369 VPSSVADVPNCVCQMP--NCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGF 542
+P + +P C +P CG H +CG NK G P P NKC +C
Sbjct: 59 LPYNKCGLPYNKCGLPYNKCGLHYNECGLPYNKCGLPYNKCGLPYNKCGLPYNKCGLPYN 118
Query: 543 GYGCP--NCARP 572
G P C P
Sbjct: 119 ECGLPYNECGLP 130
Score = 35.9 bits (79), Expect = 0.024
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = +3
Query: 369 VPSSVADVPNCVCQMP--NCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGF 542
+P + +P C +P NCG CG NK G P P NKC EC
Sbjct: 31 LPYNECGLPYNKCCLPYTNCGLPYNKCGLPYNKCGLPYNKCGLPYNKCGLHYNECGLPYN 90
Query: 543 GYGCP--NCARP 572
G P C P
Sbjct: 91 KCGLPYNKCGLP 102
Score = 31.9 bits (69), Expect = 0.39
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 14/133 (10%)
Frame = +3
Query: 171 MPNYGSGVPIDS---NFNCGCIDACGCQVPYLNILDLPF----LASFASSIPIEAYSYLL 329
+P + G+P + +N C+ C +PY N LP+ L +P
Sbjct: 24 LPYHKCGLPYNECGLPYNKCCLPYTNCGLPY-NKCGLPYNKCGLPYNKCGLPYNKCGLHY 82
Query: 330 PEVG-DFVRAPIPR----VPSSVADVPNCVCQMP--NCGCHIADCGCQRNKFGGPVQNYR 488
E G + + +P +P + +P C +P CG +CG NK G P
Sbjct: 83 NECGLPYNKCGLPYNKCGLPYNKCGLPYNKCGLPYNECGLPYNECGLPYNKCGLPYNKCG 142
Query: 489 YPLNKCECRIPEC 527
P +KC +C
Sbjct: 143 LPYDKCGLPYNKC 155
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 405 CQMP--NCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPEC 527
C +P CG +CG NK P N P NKC +C
Sbjct: 22 CGLPYHKCGLPYNECGLPYNKCCLPYTNCGLPYNKCGLPYNKC 64
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 366 RVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGFG 545
R+ +V + V MP C C IA C C+ V Y + C CR+ C+C+
Sbjct: 105 RIAHAVLRDAHVVLLMPCCSCRIACCSCR-------VVCYSCRVVFCSCRVACCSCRVVC 157
Query: 546 YGC 554
Y C
Sbjct: 158 YSC 160
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +3
Query: 369 VPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGFGY 548
+P + C C++ C + C C+ V Y + C CR+ C+C+ Y
Sbjct: 120 MPCCSCRIACCSCRVVCYSCRVVFCSCRVACCSCRVVCYSCRVACCSCRVACCSCRVVCY 179
Query: 549 GC 554
C
Sbjct: 180 SC 181
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 399 CVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGFGYGC 554
C C++ C +A C C+ V Y + CR+ C+C+ Y C
Sbjct: 151 CSCRVVCYSCRVACCSCRVACCSCRVVCYSCRVVCYSCRVACCSCRVVCYSC 202
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 405 CQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
C++ C C +A C C+ + V Y + C CR+ +C+
Sbjct: 160 CRVACCSCRVACCSCRVVCYSCRVVCYSCRVACCSCRVVCYSCR 203
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3
Query: 405 CQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGFGYGCPNC 563
C++ C C +A C C+ + V Y + C CR+ C C +C
Sbjct: 202 CRVVFCSCRVACCSCRVVCYSCRVVCYSCRVACCSCRV---VCYSCRVACCSC 251
>SB_30477| Best HMM Match : Metallothionein (HMM E-Value=8.3)
Length = 178
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 390 VPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
V C+CQ+ C C + C CQ V+ Y + C C++ C CQ
Sbjct: 74 VEYCMCQVEYCMCQVEYCMCQ-------VEYCMYQVEYCMCQVEYCMCQ 115
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 366 RVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
+V + V C+ Q+ C C + C CQ V+ Y + C ++ C CQ
Sbjct: 10 QVEYCMCQVEYCMYQVEYCMCQVEYCMCQVEYCMYQVEYCMYQVEYCMYQVEYCMCQ 66
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 390 VPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
V C+CQ+ C C + C Q V+ Y + C C++ C Q
Sbjct: 25 VEYCMCQVEYCMCQVEYCMYQVEYCMYQVEYCMYQVEYCMCQVEYCMYQ 73
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 366 RVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
+V + V C+CQ+ C C + C Q V+ + C C++ C CQ
Sbjct: 73 QVEYCMCQVEYCMCQVEYCMCQVEYCMYQ-------VEYCMCQVEYCMCQVEYCMCQ 122
>SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9)
Length = 237
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Frame = +3
Query: 216 CGC-IDACGCQVPY-LNILDLPFLASFASSIPIEAYSYLLPEVGDFVRAPIPRVPSSVAD 389
C C + C CQV Y + +++ +E Y + V + +V +
Sbjct: 77 CMCQVKYCMCQVEYCMYLVEYCMCQVKYCMCQVEYCMYQVEYCMCQVEYCMCQVEYCMCQ 136
Query: 390 VPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPEC 527
V C+CQ+ C C + C CQ V+ Y + C C++ C
Sbjct: 137 VEYCMCQVEYCMCQVEYCMCQVEYCMYQVEYCIYQVEYCMCQVEYC 182
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 366 RVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
+V + V C+CQ+ C C + C CQ V+ Y + C ++ C CQ
Sbjct: 122 QVEYCMCQVEYCMCQVEYCMCQVEYCMCQVEYCMCQVEYCMYQVEYCIYQVEYCMCQ 178
Score = 35.1 bits (77), Expect = 0.042
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 390 VPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
V C+CQ+ C C + C CQ V+ Y + C C++ C CQ
Sbjct: 67 VEYCMCQVEYCMCQVKYCMCQ-------VEYCMYLVEYCMCQVKYCMCQ 108
Score = 34.7 bits (76), Expect = 0.055
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 366 RVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
+V + V C+CQ+ C + C CQ V+ Y + C C++ C CQ
Sbjct: 73 QVEYCMCQVKYCMCQVEYCMYLVEYCMCQVKYCMCQVEYCMYQVEYCMCQVEYCMCQ 129
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 390 VPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
V C+CQ+ C + C CQ V+ Y + C C++ C CQ
Sbjct: 39 VEYCMCQVEYCMYQVKYCMCQ-------VEYCMYQVEYCMCQVEYCMCQ 80
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 390 VPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
V C+CQ+ C C + C Q V+ Y + C C++ C Q
Sbjct: 18 VEYCMCQVEYCMCQVEYCMYQVEYCMCQVEYCMYQVKYCMCQVEYCMYQ 66
>SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +3
Query: 393 PNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGFGYGCPNC 563
P C P CG H CG + G + + + ++ +C P+C G P C
Sbjct: 454 PQCGIHSPQCGIHSTQCGIHSPQCG--IHSPQCGIHSPQCGSPQCGIHSPQCGSPQC 508
Score = 33.5 bits (73), Expect = 0.13
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 451 WHPQSAIWHPQFGIWHTQF 395
W+PQS +W+PQ +W++Q+
Sbjct: 27 WYPQSPMWYPQSPMWYSQY 45
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 555 GIRNQNLGMRIPESCIHIYSADIYNSEPGHRICFVGIHNRQYGIRSSAFGIRN 397
GI + G+ P+ IH IY+ + G GIH+ Q GI S GI +
Sbjct: 186 GIHSTQCGIHSPQCGIHSPQCGIYSPQCGIHSPQCGIHSTQCGIHSPQCGIHS 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Frame = +3
Query: 321 YLLPEVGDFVRAPIPRVPSSVADVPNCV----CQMPNCGCHIADCGCQRNKFGGPVQNYR 488
+ +P V V + VP+ V VPN V C P CG H CG + G
Sbjct: 148 FTVPNVVFTVPNAVFTVPNVVFTVPNVVFSPQCGSPQCGIHSTQCGIHSPQCGIHSPQCG 207
Query: 489 YPLNKCECRIPECACQG--FGYGCPNC 563
+C P+C G P C
Sbjct: 208 IYSPQCGIHSPQCGIHSTQCGIHSPQC 234
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/58 (25%), Positives = 18/58 (31%)
Frame = +3
Query: 399 CVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGFGYGCPNCARP 572
C P CG H CG + G +C P+C G P C P
Sbjct: 449 CGIHSPQCGIHSPQCGIHSTQCGIHSPQCGIHSPQCGIHSPQCGSPQCGIHSPQCGSP 506
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +3
Query: 393 PNCVCQMPNCGCHIADCGCQRNKFG--GPVQNYRYP---LNKCECRIPECACQGFGY 548
P C P CG H CG + G P P ++ +C P+C GY
Sbjct: 274 PQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGSPQCGMYPMGY 330
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Frame = +3
Query: 324 LLPEVGDFVRAPIPRVPSSVADVPNCV-----------CQMPNCGCHIADCGCQRNKFGG 470
++P V V + VP+ V+ VPN V C P CG H CG + G
Sbjct: 392 VVPNVVFTVPNVVSTVPNVVSTVPNVVFSPQCGIHSTQCGSPQCGIHSTQCGIHSTQCG- 450
Query: 471 PVQNYRYPLNKCECRIPECACQGFGYGCPNC 563
+ + + ++ +C I C G P C
Sbjct: 451 -IHSPQCGIHSPQCGIHSTQC---GIHSPQC 477
Score = 29.1 bits (62), Expect = 2.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 451 WHPQSAIWHPQFGIWHT 401
W+PQS +W+ Q+ +W++
Sbjct: 34 WYPQSPMWYSQYPMWYS 50
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 451 WHPQSAIWHPQFGIWHTQ 398
W+ QS +W+PQ +W+ Q
Sbjct: 20 WYSQSPMWYPQSPMWYPQ 37
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/59 (25%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Frame = +3
Query: 393 PNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQG--FGYGCPNC 563
P C P CG H CG + G +C P+C G P C
Sbjct: 204 PQCGIYSPQCGIHSPQCGIHSTQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGIHSPQC 262
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/59 (25%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Frame = +3
Query: 393 PNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQG--FGYGCPNC 563
P C P CG H CG + G +C P+C G P C
Sbjct: 239 PQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGIHSPQCGIHSPQC 297
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +3
Query: 348 VRAPIPRVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPEC 527
+ +P + S + + C P CG H CG + P P +C P+C
Sbjct: 472 IHSPQCGIHSPQCGIHSPQCGSPQCGIHSPQCGSPQCGIHSPQCGIHSP--QCGIHSPQC 529
Query: 528 ACQG--FGYGCPNC 563
G P C
Sbjct: 530 GIHSPQCGIHSPQC 543
>SB_4661| Best HMM Match : MSSP (HMM E-Value=5.1)
Length = 131
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = +3
Query: 390 VPNCVCQMP--NCGCHIADCGCQRNKFGGPVQNYRYPLNKC-----ECRIPECACQGFGY 548
+P C +P CG CG NK G P P NKC +CR+P C G Y
Sbjct: 45 LPYNECGLPYNECGLPYNKCGLPYNKCGLPYNKCGLPYNKCGLLYNKCRLPYNKC-GLPY 103
Query: 549 GCPNCARP 572
C P
Sbjct: 104 N--KCGLP 109
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 405 CQMP--NCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPEC 527
C +P CG +CG NK G P P NKC +C
Sbjct: 43 CGLPYNECGLPYNECGLPYNKCGLPYNKCGLPYNKCGLPYNKC 85
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +3
Query: 420 CGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGFGYGCP--NCARP 572
CG +CG NK G P P NKC +C G P C P
Sbjct: 8 CGLPYNECGLPYNKCGLPYNKCGLPYNKCGLLYNKCGLPYNECGLPYNECGLP 60
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Frame = +3
Query: 369 VPSSVADVPNCVCQMP--NCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGF 542
+P + +P C +P CG CG NK G P P N+C +C
Sbjct: 10 LPYNECGLPYNKCGLPYNKCGLPYNKCGLLYNKCGLPYNECGLPYNECGLPYNKCGLPYN 69
Query: 543 GYGCP--NCARP 572
G P C P
Sbjct: 70 KCGLPYNKCGLP 81
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Frame = +3
Query: 369 VPSSVADVPNCVCQMP--NCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQGF 542
+P + +P C +P CG C NK G P P NKC EC G
Sbjct: 66 LPYNKCGLPYNKCGLPYNKCGLLYNKCRLPYNKCGLPYNKCGLPYNKCGLPYNEC---GL 122
Query: 543 GYGCPNCARPL 575
Y C PL
Sbjct: 123 PYN--KCGLPL 131
>SB_54945| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 392
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 177 NYGSGVPIDSNFNCGCIDACGCQVPYLNILDLPFLASFASSIPIEAYSYLLPEVGDFV 350
+Y + +PIDS N D+ +P + D S+ ++IP+++Y L DF+
Sbjct: 86 SYSNAMPIDSYSNAMPFDSYSNAMPIDSYSDAVPFDSYGNAIPLDSYLMLFTYPNDFL 143
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +3
Query: 141 PLCGCQKQLEMPNYGSGVPIDSNFNCGCIDACGCQVPYLNILDLPFLASFASSIPIEAYS 320
P K + Y + P DS N + +P L+ + + S+++++P ++YS
Sbjct: 47 PFDAYSKTMPFDAYSNATPFDSTSNVTLFHSYSNAMPILSYSNAMPIDSYSNAMPFDSYS 106
Query: 321 YLLP 332
+P
Sbjct: 107 NAMP 110
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +3
Query: 141 PLCGCQKQLEMPNYGSGVPIDSNFNCGCIDACGCQVPYLNILDLPFLASFASSIPIEAYS 320
P C + + +Y P D+ DA P+ + ++ S+++++PI +YS
Sbjct: 29 PFGSCSNVMLIDSYCKATPFDAYSKTMPFDAYSNATPFDSTSNVTLFHSYSNAMPILSYS 88
Query: 321 YLLP 332
+P
Sbjct: 89 NAMP 92
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 180 YGSGVPIDSNFNCGCIDACGCQVPYLNILDLPFLASFASSIPIEAYSYLLP 332
Y +P D+ N D+ P+ + ++ + S+ + P +AYS +P
Sbjct: 6 YSKTMPFDAYSNATPFDSYSNATPFGSCSNVMLIDSYCKATPFDAYSKTMP 56
>SB_2595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 531 CQGFGYGCPNCAR 569
CQG+GYGC CAR
Sbjct: 92 CQGYGYGCSCCAR 104
>SB_23682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +3
Query: 405 CQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
CQM + C ++D CQ + + R + C++ + CQ
Sbjct: 374 CQMQDVRCKMSDARCQMQDVRCTMSDARCQMQDVRCKMSDARCQ 417
>SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 414 PNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECR 515
P HI C + F G + R PL K ECR
Sbjct: 112 PRLRVHIGICSPRLRVFDGAIHPVRKPLTKLECR 145
>SB_9505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -3
Query: 556 GHP*PKPWHAHSGILHSHLFSGYL*F*TGPPNLFRWHPQSAIWHPQFGIWHTQF 395
GHP K H I H G+ + G P+ HP + HP + + H +
Sbjct: 198 GHPSYKMGHPSYQIGHPSYVMGHPSYVMGHPSYVMGHPSYVMGHPSYVMGHPSY 251
>SB_59276| Best HMM Match : TraN (HMM E-Value=4.3)
Length = 46
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 405 CQMPNCGCHIADCGCQRNKFGGPVQNYRYPL--NKCECRI 518
CQM + C ++D CQ P+Q+ R + +K CR+
Sbjct: 6 CQMQDVRCKMSDARCQMQDVRCPMQDVRCKMTSDKSTCRV 45
>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
Length = 439
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 501 KCECRIPECACQGFGYGCPNCARPLT 578
KCECR P Q CP C P T
Sbjct: 137 KCECRAPYTGTQCDTIKCPECCPPET 162
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 291 QMMLEKVNLECLDTGLGTRKHLYSHN*SSNQLAPRIHNLAFLVVFD 154
+M +++ L D LGT + S N+LAPR+H AF + ++
Sbjct: 849 KMKIQEAQLANPDVPLGTAEQFLLTMASLNELAPRLHLWAFKLDYE 894
>SB_11551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 399 CVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPEC 527
C ++ CG ++ CG + N G V Y +N C R+ C
Sbjct: 193 CGIRVSYCGIRVSYCGIRVNYCGIRVNYYGTRVNYCGIRVSYC 235
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = -1
Query: 555 GIRNQNLGMRIPESCIHIYSADIYNSEPGHRICFVGIHNRQYGIRSSAFGIRNSVHLRRM 376
GIR G R+ I + I S G R+ + GI GIR S GIR S RR+
Sbjct: 334 GIRVSYCGTRVNYCGILVNYCGIRVSYCGIRVSYCGIRVNYCGIRVSYCGIRVSYCGRRV 393
>SB_46410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 405 CQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
C+M + C ++D CQ + + R ++ C++ + CQ
Sbjct: 7 CKMQDVRCKMSDARCQMQDVRCKMSDARCQMHDVRCKMSDARCQ 50
>SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +3
Query: 405 CQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
C+M + C ++D CQ + + R ++ C++ + CQ
Sbjct: 369 CKMQDVRCKMSDARCQMQDVRCKMSDARCQMHDVRCKMSDARCQ 412
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 177 NYGSGVPIDSNFNCGC 224
NYG G D N+ CGC
Sbjct: 212 NYGCGYGCDGNYGCGC 227
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = -3
Query: 532 HAHSGILHSHLFSGYL*F*TGPPNLFRWHPQSAIWHPQFGIWHTQFGTSATDDGTRGIGA 353
H S I+H H S + P ++ HP S I HP I H +S+ +
Sbjct: 344 HPSSIIIHHHPSSSII---HHPSSIIHHHPSSIIHHPSSIIHHPSSSSSSLSSSLSSSSS 400
Query: 352 RTKSPTS 332
+ S +S
Sbjct: 401 SSSSLSS 407
>SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2)
Length = 303
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 298 ELANDARKGKSRMFRYGTWHPQASI 224
EL N RK + RM YG HP+A++
Sbjct: 58 ELENIDRKTRKRMTIYGMLHPRANV 82
>SB_31029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 378 SVADVPNCVCQMPNCGCHIADCGC 449
S D + +C++P G +ADC C
Sbjct: 385 SYQDAHSALCKLPGIGSKVADCVC 408
>SB_24939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Frame = +3
Query: 309 EAYSYLLPEVGDFVRAPIPRVPSSVADVPNCVCQMPNCGCHIA----DCGCQRNKFGGPV 476
E+Y ++ P+ G +V + + +C GC +A C R + G P+
Sbjct: 18 ESYWHVTPQAGQYVSVFVENSSGKPIIISSCPLARYRKGCPLARYRKGCPLARYRKGCPL 77
Query: 477 QNYRYPLNKCECRIPECACQGFGYGCP 557
YR R C + GCP
Sbjct: 78 ARYRKGCPLARYR-KGCPLTRYRKGCP 103
>SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 307
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 298 ELANDARKGKSRMFRYGTWHPQASI 224
EL N RK + RM YG HP+A++
Sbjct: 24 ELENIDRKTRKRMTIYGMLHPRANV 48
>SB_2784| Best HMM Match : UCR_14kD (HMM E-Value=1.5)
Length = 413
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 298 ELANDARKGKSRMFRYGTWHPQASI 224
EL N RK + RM YG HP+A++
Sbjct: 229 ELENIDRKTRKRMTIYGMLHPRANV 253
>SB_1611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/57 (21%), Positives = 22/57 (38%)
Frame = +3
Query: 366 RVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
+V + V C C+ C + C C+ G VQ + +C++ C+
Sbjct: 16 KVQTRKCKVQTCKCKAQTCKGKVQTCKCKAQTCKGKVQTRKCKEQTRKCKVQTRKCK 72
>SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4)
Length = 202
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 298 ELANDARKGKSRMFRYGTWHPQASI 224
EL N RK + RM YG HP+A++
Sbjct: 24 ELENIDRKTRKRMTIYGMLHPRANV 48
>SB_21069| Best HMM Match : KE2 (HMM E-Value=0.59)
Length = 341
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/57 (21%), Positives = 22/57 (38%)
Frame = +3
Query: 366 RVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYRYPLNKCECRIPECACQ 536
+V + V C C+ C + C C+ G VQ + +C++ C+
Sbjct: 16 KVQTRKCKVQTCKCKAQTCKGKVQTCKCKAQTCKGKVQTRKCKEQTRKCKVQTRKCK 72
>SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 279
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 298 ELANDARKGKSRMFRYGTWHPQASI 224
EL N RK + RM YG HP+A++
Sbjct: 24 ELENIDRKTRKRMTIYGMLHPRANV 48
>SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2)
Length = 298
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 298 ELANDARKGKSRMFRYGTWHPQASI 224
EL N RK + RM YG HP+A++
Sbjct: 25 ELENIDRKTRKRMTIYGMLHPRANV 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,582,859
Number of Sequences: 59808
Number of extensions: 439767
Number of successful extensions: 1554
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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