Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d09
         (579 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051903-1|AAK93327.1|  493|Drosophila melanogaster LD39232p pro...    31   1.1  
AE014134-3352|AAF53972.3|  493|Drosophila melanogaster CG9243-PA...    31   1.1  
AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB...    31   1.1  
AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-P...    25   3.0  
U35631-2|AAB61476.1| 1186|Drosophila melanogaster MEI-218 protein.     29   4.5  
BT023750-1|AAZ41758.1| 1186|Drosophila melanogaster SD24912p pro...    29   4.5  
AY122070-1|AAM52582.1| 1186|Drosophila melanogaster AT14088p pro...    29   4.5  
AE014298-2524|AAF48699.1| 1186|Drosophila melanogaster CG8923-PC...    29   4.5  
AE014298-2523|AAN09433.2| 1186|Drosophila melanogaster CG8923-PB...    29   4.5  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   6.0  
AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein ...    28   7.9  

>AY051903-1|AAK93327.1|  493|Drosophila melanogaster LD39232p
           protein.
          Length = 493

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +3

Query: 357 PIPRVPSSVADVPNCVCQMPNCGCHIAD----CGCQ 452
           P+PR P     +    C+ PNCG  + D    C C+
Sbjct: 16  PVPRAPEEPTPLTTSCCRRPNCGLGLQDERNICSCK 51


>AE014134-3352|AAF53972.3|  493|Drosophila melanogaster CG9243-PA,
           isoform A protein.
          Length = 493

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +3

Query: 357 PIPRVPSSVADVPNCVCQMPNCGCHIAD----CGCQ 452
           P+PR P     +    C+ PNCG  + D    C C+
Sbjct: 16  PVPRAPEEPTPLTTSCCRRPNCGLGLQDERNICSCK 51


>AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB,
           isoform B protein.
          Length = 574

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +3

Query: 357 PIPRVPSSVADVPNCVCQMPNCGCHIAD----CGCQ 452
           P+PR P     +    C+ PNCG  + D    C C+
Sbjct: 16  PVPRAPEEPTPLTTSCCRRPNCGLGLQDERNICSCK 51


>AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-PA,
            isoform A protein.
          Length = 1473

 Score = 25.4 bits (53), Expect(2) = 3.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 412  IWHTQFGTSATDDGTRGIGARTKS 341
            +WH  FG+ A  +   G G RT S
Sbjct: 1226 LWHPLFGSRAQKEPAPGSGTRTAS 1249



 Score = 22.6 bits (46), Expect(2) = 3.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 439  SAIWHPQFG 413
            SA+WHP FG
Sbjct: 1224 SALWHPLFG 1232


>U35631-2|AAB61476.1| 1186|Drosophila melanogaster MEI-218 protein.
          Length = 1186

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 407 PNAELRMPYCRLWMPTKQIRWPGSEL*ISAE*M*MQDSGMRMPRFWLRMPELRSAID 577
           P A +  P   +W  +K++  P     +SAE     D G R  RF  R P +R+  D
Sbjct: 65  PKAGVYKPNVNVWRLSKEVTKPDRSFVVSAE--EYPDLGQRPKRFKQRTPRVRNQDD 119


>BT023750-1|AAZ41758.1| 1186|Drosophila melanogaster SD24912p
           protein.
          Length = 1186

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 407 PNAELRMPYCRLWMPTKQIRWPGSEL*ISAE*M*MQDSGMRMPRFWLRMPELRSAID 577
           P A +  P   +W  +K++  P     +SAE     D G R  RF  R P +R+  D
Sbjct: 65  PKAGVYKPNVNVWRLSKEVTKPDRSFVVSAE--EYPDLGQRPKRFKQRTPRVRNQDD 119


>AY122070-1|AAM52582.1| 1186|Drosophila melanogaster AT14088p
           protein.
          Length = 1186

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 407 PNAELRMPYCRLWMPTKQIRWPGSEL*ISAE*M*MQDSGMRMPRFWLRMPELRSAID 577
           P A +  P   +W  +K++  P     +SAE     D G R  RF  R P +R+  D
Sbjct: 65  PKAGVYKPNVNVWRLSKEVTKPDRSFVVSAE--EYPDLGQRPKRFKQRTPRVRNQDD 119


>AE014298-2524|AAF48699.1| 1186|Drosophila melanogaster CG8923-PC,
           isoform C protein.
          Length = 1186

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 407 PNAELRMPYCRLWMPTKQIRWPGSEL*ISAE*M*MQDSGMRMPRFWLRMPELRSAID 577
           P A +  P   +W  +K++  P     +SAE     D G R  RF  R P +R+  D
Sbjct: 65  PKAGVYKPNVNVWRLSKEVTKPDRSFVVSAE--EYPDLGQRPKRFKQRTPRVRNQDD 119


>AE014298-2523|AAN09433.2| 1186|Drosophila melanogaster CG8923-PB,
           isoform B protein.
          Length = 1186

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 407 PNAELRMPYCRLWMPTKQIRWPGSEL*ISAE*M*MQDSGMRMPRFWLRMPELRSAID 577
           P A +  P   +W  +K++  P     +SAE     D G R  RF  R P +R+  D
Sbjct: 65  PKAGVYKPNVNVWRLSKEVTKPDRSFVVSAE--EYPDLGQRPKRFKQRTPRVRNQDD 119


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +3

Query: 348   VRAPIPRVPSSVADVPNCVCQMPNCGCHIADCGCQRNKFGGPVQNYR 488
             V  PI R P  ++D  + +   PN  C+   C C     G P+   R
Sbjct: 16993 VPPPIVRDPPQISDPCDLITCGPNAVCNQGQCNCLPEFVGNPLVGCR 17039


>AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein
           protein.
          Length = 849

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -1

Query: 549 RNQNLGMRI---PESCIHIYSADIYNSEPGHRICFVGIHNR 436
           RN  + M+I   PE C   +  DIY+SE  H +  + I+++
Sbjct: 767 RNTEMPMKITPKPEHCRDKFVIDIYSSEGNHYLSCIDIYSK 807


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,351,087
Number of Sequences: 53049
Number of extensions: 659149
Number of successful extensions: 1550
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)