Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d09
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    25   0.41 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.41 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.71 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.71 
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   1.2  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   1.2  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   1.2  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   1.2  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    24   1.2  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    24   1.2  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    24   1.2  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    24   1.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   5.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   8.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.8  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
 Frame = +2

Query: 203 FELQLWLYRCLRVPSPV-----SKHSRFTFSSIICQFYTYR 310
           F +  WL  C    +P      SK  RF F SIIC+ +  R
Sbjct: 44  FSVLFWLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKR 84


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
 Frame = +2

Query: 203 FELQLWLYRCLRVPSPV-----SKHSRFTFSSIICQFYTYR 310
           F +  WL  C    +P      SK  RF F SIIC+ +  R
Sbjct: 492 FSVLFWLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKR 532


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 234 CGCQVPYLNILDLPFLASFASSIPIEAYSYLLPEVGDFVRAPIPRVPS 377
           C     Y+ ++D PFLAS  ++  I+    L+     FV   +P V S
Sbjct: 463 CHADDAYM-VVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNS 509


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 234 CGCQVPYLNILDLPFLASFASSIPIEAYSYLLPEVGDFVRAPIPRVPS 377
           C     Y+ ++D PFLAS  ++  I+    L+     FV   +P V S
Sbjct: 463 CHADDAYM-VVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNS 509


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 156 PPNAYRFHPP---LNPRFGPTH 174


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 156 PPNAYRFHPP---LNPRFGPTH 174


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 156 PPNAYRFHPP---LNPRFGPTH 174


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 156 PPNAYRFHPP---LNPRFGPTH 174


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 160 PPNAYRFHPP---LNPRFGPTH 178


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 165 PPNAYRFHPP---LNPRFGPTH 183


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 165 PPNAYRFHPP---LNPRFGPTH 183


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 469 PPNLFRWHPQSAIWHPQFGIWH 404
           PPN +R+HP     +P+FG  H
Sbjct: 165 PPNAYRFHPP---LNPRFGPTH 183


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 391 YRIAYAKCRTADAILPIV 444
           Y+  Y K  T DAIL I+
Sbjct: 174 YKADYTKISTLDAILDII 191


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 419 LRMPYCRLWMP 451
           +R+PY R+W P
Sbjct: 80  IRVPYNRVWRP 90


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +3

Query: 72  FCVFADSQVISSFKTTKTNKFRLPLCGCQKQLEMPNY 182
           +C+F DS   +S     +   ++ +    K+L  P+Y
Sbjct: 538 YCLFGDSVNTASRMEATSQAMQIHISQSTKELLSPSY 574


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,501
Number of Sequences: 438
Number of extensions: 4868
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)