Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d08
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.65 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.65 
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   4.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 535 YVTSHPTLVPPTRIQELPE 479
           +++SHP +V P   QELP+
Sbjct: 242 HLSSHPAIVTPGPKQELPD 260


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 535 YVTSHPTLVPPTRIQELPE 479
           +++SHP +V P   QELP+
Sbjct: 134 HLSSHPAIVTPGPKQELPD 152


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +1

Query: 532 HIVVGTDELTTVDEYENNIKTD 597
           +++VG++    ++ Y  N++TD
Sbjct: 47  NLIVGSENCLVLNVYTKNLRTD 68


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 308 HWMSRQSVITTKYSSTSPLA 367
           H  +  S+ITT   S SPLA
Sbjct: 257 HGSNTSSLITTPSPSASPLA 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,877
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)