Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10d07
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55360.1 68416.m06148 3-oxo-5-alpha-steroid 4-dehydrogenase f... 131 4e-31
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 36 0.025
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 36 0.025
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 33 0.14
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 33 0.18
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 33 0.18
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 32 0.41
At5g16010.1 68418.m01872 3-oxo-5-alpha-steroid 4-dehydrogenase f... 31 0.96
At4g19050.1 68417.m02806 mob1/phocein family protein contains Pf... 30 1.3
At3g57940.1 68416.m06458 expressed protein contains Pfam profile... 30 1.3
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 30 1.3
At5g60800.1 68418.m07628 heavy-metal-associated domain-containin... 29 2.2
At5g36740.1 68418.m04402 PHD finger family protein 29 3.9
At5g36670.1 68418.m04388 PHD finger family protein 29 3.9
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 29 3.9
At1g51710.1 68414.m05827 ubiquitin-specific protease 6, putative... 29 3.9
At1g14350.1 68414.m01701 myb family transcription factor (MYB124... 29 3.9
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 28 5.1
At5g03320.1 68418.m00283 protein kinase, putative similar to ser... 28 5.1
At3g18080.1 68416.m02299 glycosyl hydrolase family 1 protein con... 28 5.1
At3g18200.1 68416.m02315 nodulin MtN21 family protein similar to... 28 6.8
At2g20142.1 68415.m02355 expressed protein 28 6.8
At5g41610.2 68418.m05055 cation/hydrogen exchanger, putative (CH... 27 8.9
At5g41610.1 68418.m05056 cation/hydrogen exchanger, putative (CH... 27 8.9
At3g17540.1 68416.m02240 F-box family protein similar to hypothe... 27 8.9
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 27 8.9
>At3g55360.1 68416.m06148 3-oxo-5-alpha-steroid 4-dehydrogenase
family protein / steroid 5-alpha-reductase family
protein similar to synaptic glycoprotein SC2 spliced
variant from Homo sapiens [EMBL:AF038958], SC2 from
Rattus sp. [gi:256994]; contains Pfam
3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544
Length = 310
Score = 131 bits (317), Expect = 4e-31
Identities = 75/191 (39%), Positives = 104/191 (54%), Gaps = 12/191 (6%)
Frame = +2
Query: 134 MEIEILSVSSAKPL-GKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 310
M++ ++S S + L + + +++ +++E + KK YP RQ L L +
Sbjct: 1 MKVTVVSRSGREVLKAPLDLPDSATVADLQEAFHKRAKK-FYPSRQRLTLPVTPGSKDKP 59
Query: 311 DTLNSLNIQ----DGSK----LFLKDLGPQVSWRNVFLAEYAGPLFVYLWVYQRP---WI 457
LNS DG+ + KDLG QVS+R +F EY GPL +Y Y P ++
Sbjct: 60 VVLNSKKSLKEYCDGNNNSLTVVFKDLGAQVSYRTLFFFEYLGPLLIYPVFYYFPVYKFL 119
Query: 458 LYGTQTSSPEQVATVAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFRNCAYYWLFALY 637
YG + V T A W HY KR+ ET F+HRFSH T P+ N+FRNCAYYW F Y
Sbjct: 120 GYG-EDCVIHPVQTYAMYYWCFHYFKRILETFFVHRFSHATSPIGNVFRNCAYYWSFGAY 178
Query: 638 VAYHVNHPLYT 670
+AY+VNHPLYT
Sbjct: 179 IAYYVNHPLYT 189
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 35.9 bits (79), Expect = 0.025
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 182 IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
+ V +I NVKEKIQ VK+ + PD+Q L G+ L+D TL +I S L+L
Sbjct: 566 LEVESSDTIANVKEKIQ--VKEGIKPDQQMLIF--FGQQLEDGVTLGDYDIHKKSTLYL 620
Score = 33.5 bits (73), Expect = 0.14
Identities = 28/75 (37%), Positives = 38/75 (50%)
Frame = +2
Query: 134 MEIEILSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDED 313
M I+I + + + + V SI NVK KIQ K+ + D+Q +L GK L+D
Sbjct: 1 MTIQIYAKTLTEKTITLDVETSDSIHNVKAKIQN--KEGIPLDQQ--RLIFAGKQLEDGL 56
Query: 314 TLNSLNIQDGSKLFL 358
TL NIQ S L L
Sbjct: 57 TLADYNIQKESTLHL 71
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 182 IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
+ V +I+NVK KIQ ++ L PD Q L + +D TL I++ S L L
Sbjct: 174 LKVESSDTIENVKAKIQD--REGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCL 230
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +2
Query: 179 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
K+HV E S+ +++ K + + + + +A+K+ KGK L DE +L + N+Q S + L
Sbjct: 674 KLHVGIEESVSSLRAKASRKLD---FKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHL 730
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 182 IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
+ V +I+N+K KIQ K+ + D+Q +L KGK L+D TL NIQ+ S L L
Sbjct: 100 LEVENCDTIENIKAKIQD--KQGIPVDQQ--RLIFKGKQLEDGLTLADYNIQNDSILHL 154
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 179 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGS 346
+I V E S+ +VK+ I+ +YP + + + +GK LKDE T+ + + S
Sbjct: 14 EIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIH-QGKVLKDETTIEENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 179 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGS 346
+I V E S+ +VK+ I+ +YP + + + +GK LKDE T+ + + S
Sbjct: 14 EIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIH-QGKVLKDETTIEENKVAENS 68
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 179 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGS 346
+I V + +VK I+ +VK + YP + + + +GK LKDE TL N+ + S
Sbjct: 14 EIEVKPADKVSDVKTAIE-TVKGAEYPAAKQMLIH-QGKVLKDETTLEENNVVENS 67
>At5g16010.1 68418.m01872 3-oxo-5-alpha-steroid 4-dehydrogenase
family protein / steroid 5-alpha-reductase family
protein similar to steroid 5alpha-reductase - Rattus
norvegicus, PIR:A34239 [SP|24008]; contains Pfam
3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544
Length = 268
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 524 HYAKRLFETLFIHRFSHG 577
H+ KR+FE LFIH++S G
Sbjct: 104 HFFKRVFEVLFIHKYSGG 121
>At4g19050.1 68417.m02806 mob1/phocein family protein contains Pfam
PF03637: Mob1/phocein family; contains Pfam F00560:
Leucine Rich Repeats; contains TIGRFAMS profile
TIGR01612: reticulocyte binding protein; hypothetical
protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466
Length = 1405
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 206 IKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQD 340
++++KEKI++ + K D L L+ +G +ED + LN+QD
Sbjct: 99 LESLKEKIKEEMIKHK-KDNLLLILDDEGSMTTEEDVMQELNLQD 142
>At3g57940.1 68416.m06458 expressed protein contains Pfam profile
PF05127: Putative ATPase (DUF699)
Length = 1024
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 580 DAIEELVQKLCILLVVCPLCGLSCEPSPIHCSLYYL 687
D IE + L L V L +C PSP C LYY+
Sbjct: 480 DPIESWLNGLLCLDVATCLPNPACHPSPSQCDLYYV 515
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 149 LSVSSAKPLGKIHVTG-ESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNS 325
+ +S+ G + G E S+ ++K K + + + + +A+K+ GK L+DE +L
Sbjct: 502 IKLSNLGGKGSLLTVGREESVSSLKAKASRKLD---FKETEAVKMFYMGKELEDEKSLAE 558
Query: 326 LNIQDGSKLFL 358
N+Q S + L
Sbjct: 559 QNVQPNSLVHL 569
>At5g60800.1 68418.m07628 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 283
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 152 SVSSAKPLGKIHVTGESSIKNVKEKIQQSVKK--SLYPDRQALKLEAKGKTLKDEDTLNS 325
+V S GK+ VTG ++EK+++ KK L + + E + K DED S
Sbjct: 55 TVKSESATGKLTVTGALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKNKNDEDKKKS 114
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 188 VTGESSIKNVKEKIQQSVKKSLYPD 262
V+G SS+ VKE+++Q KSL P+
Sbjct: 90 VSGGSSVDEVKEEVKQECVKSLVPE 114
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 188 VTGESSIKNVKEKIQQSVKKSLYPD 262
V+G SS+ VKE+++Q KSL P+
Sbjct: 90 VSGGSSVDEVKEEVKQECVKSLVPE 114
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 182 IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 358
+ V+ + ++K++K ++Q ++ P Q KL KGK L + TL ++ G+KL L
Sbjct: 549 LSVSPDCTVKDLKSQLQPIT--NVLPRGQ--KLIFKGKVLVETSTLKQSDVGSGAKLML 603
>At1g51710.1 68414.m05827 ubiquitin-specific protease 6, putative
(UBP6) similar to GI:11993465
Length = 482
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 257 PDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFLKDLGPQV 379
P+RQ K+ KG LKD+ ++ ++DG KL + ++
Sbjct: 39 PERQ--KIMVKGGLLKDDGDWAAIGVKDGQKLMMMGTADEI 77
>At1g14350.1 68414.m01701 myb family transcription factor (MYB124)
contains PFAM profile: PF00249 myb-like DNA binding
domain
Length = 436
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 164 AKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKG-KTLKDEDTLNSLNIQD 340
AK L + H+ + I N + + V + + L A G +L++++ +++N D
Sbjct: 161 AKKLKRSHILDLTEISNYG-RAEACVNQQIRSPFSVLARNATGIDSLEEQNQTSNVNESD 219
Query: 341 GSKLFLKDLGPQVS 382
G +FLK P+V+
Sbjct: 220 GEGMFLKKDDPKVT 233
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 28.3 bits (60), Expect = 5.1
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 134 MEIEILSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDED 313
M ++I + + + I V +I NVK KIQ + + D+Q +L GK L D
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDI--EGIPLDQQ--RLIFSGKLLDDGR 56
Query: 314 TLNSLNIQDGSKLFL 358
TL +IQ S L L
Sbjct: 57 TLADYSIQKDSILHL 71
>At5g03320.1 68418.m00283 protein kinase, putative similar to
serine/threonine-protein kinase NAK [Arabidopsis
thaliana] SWISS-PROT:P43293
Length = 420
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 90 IIKYNYLGVNSNRN-VKMKGHCCTLDER 10
+ + N+LGV + N VK+ GHC DER
Sbjct: 129 VTEVNFLGVVEHSNLVKLLGHCAEDDER 156
>At3g18080.1 68416.m02299 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase BGQ60 precursor GB:A57512
[Hordeum vulgare]; similar to beta-mannosidase enzyme
(GI:17226270) [Lycopersicon esculentum]
Length = 512
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +2
Query: 359 KDLGPQVSWRNVF----LAEYAGPLFVYLWVYQRPWILY 463
KDLG Q W F L + GP W+Y PW +Y
Sbjct: 362 KDLGYQQDWNVEFGFAKLGKPIGPRAYSSWLYNVPWGMY 400
>At3g18200.1 68416.m02315 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 360
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 377 VSWRNVFLAEYAGPLFVYLWVYQRPWILY 463
VSW +F YAG + L VY + W +Y
Sbjct: 244 VSWEELFTILYAGIIASGLVVYLQTWCIY 272
>At2g20142.1 68415.m02355 expressed protein
Length = 159
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = +2
Query: 425 VYLWVYQRPWILYGTQTSS-----PEQVATVAAIC 514
V+ W + PW Y TQ S+ PE + V A+C
Sbjct: 82 VWKWTWPIPWFHYQTQRSNRFGSFPEMLGLVCALC 116
>At5g41610.2 68418.m05055 cation/hydrogen exchanger, putative
(CHX18) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 742
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 170 PLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDED 313
P+G + ++ ESS K IQQ + PD A + E T KD D
Sbjct: 695 PVGSLLISPESSTKASVLVIQQYNGTGIAPDLGAAETEVLTSTDKDSD 742
>At5g41610.1 68418.m05056 cation/hydrogen exchanger, putative
(CHX18) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 810
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 170 PLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDED 313
P+G + ++ ESS K IQQ + PD A + E T KD D
Sbjct: 763 PVGSLLISPESSTKASVLVIQQYNGTGIAPDLGAAETEVLTSTDKDSD 810
>At3g17540.1 68416.m02240 F-box family protein similar to
hypothetical protein GB:AAD18122 from [Arabidopsis
thaliana];contains Pfam PF00646: F-box domain; contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 396
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 128 HNMEIEILSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKD 307
H +E EILS K L K+H T + ++ + VKK+ + L L + K
Sbjct: 12 HEIESEILSRVPTKSLAKLHTTCKRWYALFRD--PRFVKKNFGKSERRLMLHSNFGVYKI 69
Query: 308 EDTLNS-LNIQDGSKLFLKDL 367
D L+ LN D S F L
Sbjct: 70 TDDLHGILNSGDPSLEFTSKL 90
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 197 ESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQ 337
+S++++ KE + QS S P Q +L KG+ LKD+ TL S +Q
Sbjct: 37 DSTVESFKELVAQS---SDVPANQQ-RLIYKGRILKDDQTLLSYGLQ 79
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,860,811
Number of Sequences: 28952
Number of extensions: 311113
Number of successful extensions: 829
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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