Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d05
         (533 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S82447-1|AAB37682.1|  125|Homo sapiens GCN5-like 1 protein.           153   5e-37
D64007-1|BAA10887.1|  125|Homo sapiens RT14 protein.                  153   5e-37
BC132795-1|AAI32796.1|  125|Homo sapiens biogenesis of lysosome-...   153   5e-37
BC130640-1|AAI30641.1|  125|Homo sapiens biogenesis of lysosome-...   153   5e-37
U93573-1|AAC51277.1|  338|Homo sapiens p40 protein.                    29   7.8  

>S82447-1|AAB37682.1|  125|Homo sapiens GCN5-like 1 protein.
          Length = 125

 Score =  153 bits (370), Expect = 5e-37
 Identities = 75/119 (63%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
 Frame = +2

Query: 113 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 292
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 293 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KAQEKPS 466
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + Q  PS
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQLQSAPS 125


>D64007-1|BAA10887.1|  125|Homo sapiens RT14 protein.
          Length = 125

 Score =  153 bits (370), Expect = 5e-37
 Identities = 75/119 (63%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
 Frame = +2

Query: 113 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 292
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 293 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KAQEKPS 466
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + Q  PS
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQLQSAPS 125


>BC132795-1|AAI32796.1|  125|Homo sapiens biogenesis of
           lysosome-related organelles complex-1, subunit 1
           protein.
          Length = 125

 Score =  153 bits (370), Expect = 5e-37
 Identities = 75/119 (63%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
 Frame = +2

Query: 113 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 292
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 293 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KAQEKPS 466
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + Q  PS
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQLQSAPS 125


>BC130640-1|AAI30641.1|  125|Homo sapiens biogenesis of
           lysosome-related organelles complex-1, subunit 1
           protein.
          Length = 125

 Score =  153 bits (370), Expect = 5e-37
 Identities = 75/119 (63%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
 Frame = +2

Query: 113 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 292
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 293 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KAQEKPS 466
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + Q  PS
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQLQSAPS 125


>U93573-1|AAC51277.1|  338|Homo sapiens p40 protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 15/74 (20%), Positives = 37/74 (50%)
 Frame = +2

Query: 227 GVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIEND 406
           GV ++  ++ + D + K   +   NF K  ++ +T + N    LKE+ +++  AR +  +
Sbjct: 46  GVRRSNYSELREDIQTK--GKEVENFEKNLEECITRISNTEKCLKELMELKTKARELREE 103

Query: 407 MKIITDTLERAYEK 448
            + +    ++  E+
Sbjct: 104 CRSLRSRCDQLEER 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,552,981
Number of Sequences: 237096
Number of extensions: 1105415
Number of successful extensions: 2631
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2630
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)