Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d05
         (533 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30330.1 68415.m03691 GCN5L1 family protein similar to GCN5-l...    80   8e-16
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha...    33   0.16 
At5g38570.1 68418.m04664 F-box family protein contains F-box dom...    31   0.48 
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha...    28   3.4  
At3g04980.1 68416.m00541 DNAJ heat shock N-terminal domain-conta...    28   3.4  
At3g52570.1 68416.m05788 expressed protein contains Interpro ent...    28   4.5  
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar...    27   5.9  
At5g04990.1 68418.m00528 sad1/unc-84 protein-related contains we...    27   7.9  

>At2g30330.1 68415.m03691 GCN5L1 family protein similar to GCN5-like
           protein 1 (RT14 protein) (Swiss-Prot:P78537) [Homo
           sapiens]
          Length = 152

 Score = 80.2 bits (189), Expect = 8e-16
 Identities = 39/100 (39%), Positives = 58/100 (58%)
 Frame = +2

Query: 155 EQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTL 334
           E+ RKE I  A      LV  +N GV + ++N+K++++E + L      F KQT QWL +
Sbjct: 53  ERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAITVAKFGKQTDQWLAV 112

Query: 335 VENFSSALKEIGDVENWARSIENDMKIITDTLERAYEKAQ 454
               +SA+KEIGD ENW +++E D K IT  +   +E  Q
Sbjct: 113 THAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHEDQQ 152


>At2g17930.1 68415.m02076 FAT domain-containing protein /
            phosphatidylinositol 3- and 4-kinase family protein
            contains Pfam profiles PF02259 FAT domain, PF00454
            Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
            domain
          Length = 3795

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +2

Query: 272  AKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDT 427
            A+ + Q   + S+    + T  EN   A++  G V +W R  +N+MK++TDT
Sbjct: 1888 AQFVPQMVNSLSRLGLPYNTTAENRRLAIELAGLVVSWERQRQNEMKMVTDT 1939


>At5g38570.1 68418.m04664 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 379

 Score = 31.1 bits (67), Expect = 0.48
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -1

Query: 338 PQESTIAVFVWKNLLHLGVKVLLPHLTFSDLNRLEQHRHLNDLP 207
           PQ+  IAV++ KN  HL     L     +D+ RL+  + L   P
Sbjct: 322 PQDRDIAVYILKNACHLKTATFLTDKRINDVRRLKMIKELRLSP 365


>At4g36080.1 68417.m05136 FAT domain-containing protein /
            phosphatidylinositol 3- and 4-kinase family protein
            contains Pfam profiles PF00454: Phosphatidylinositol 3-
            and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
          Length = 3839

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +2

Query: 272  AKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 424
            A+ + Q   + S+    + T  EN   A++  G V +W R  +N+ K++TD
Sbjct: 1944 AQFVPQMVNSLSRLGLPYNTTAENRRLAIELAGLVVSWERQRQNESKMVTD 1994


>At3g04980.1 68416.m00541 DNAJ heat shock N-terminal
           domain-containing protein contains Pfam profile PF00226
           DnaJ domain
          Length = 1165

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +2

Query: 320 QWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYEK 448
           Q +T+ +  SSA+K+I  +++W   ++       DT+++ Y K
Sbjct: 28  QMMTICDVHSSAIKKIKGLDDWYGVLQVQPYADADTIKKQYRK 70


>At3g52570.1 68416.m05788 expressed protein contains Interpro entry
           IPR000379
          Length = 335

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +2

Query: 296 INFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYEKAQEKP 463
           + FS+   +W+       S LK  GD E W  +++  +++     E +Y    E P
Sbjct: 213 LGFSRSLSEWI------GSNLKRSGDSETWTFNLDGAVQMFNSYRETSYWSLLENP 262


>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
           to  M protein, serotype 5 precursor (SP:P02977)
           {Streptococcus pyogenes} and to Myosin heavy chain,
           non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
           {Drosophila melanogaster}
          Length = 537

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
 Frame = +2

Query: 119 HQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAI 298
           H+    A+++  E K     T  N  TQ   +  N  V++    + K   E  L   G  
Sbjct: 343 HRRIHVAEQIHLESKSSYIKTRDN--TQTEENRGNRAVSETQFKKIKEMVEQGLA--GPE 398

Query: 299 NFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE--KAQE 457
              K+ ++   L    +   KEI     W +  +N+MK   +TLE   E  +AQE
Sbjct: 399 MAIKKLEESGELGNRVTRLAKEIDSARKWVKEKDNNMKHEVETLEAKLECREAQE 453


>At5g04990.1 68418.m00528 sad1/unc-84 protein-related contains weak
           similarity to Sad1/unc-84 protein-like 1
           (Swiss-Prot:O94901) [Homo sapiens]
          Length = 471

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 24/94 (25%), Positives = 43/94 (45%)
 Frame = +2

Query: 176 ITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSA 355
           I   + L +A  + + V   Q  L  KK++ EAK+L Q     +   Q  L  +E+ + +
Sbjct: 158 IAEVDGLVKATTNSMQV---QVELLDKKMEREAKVLRQEIERKASAFQSELKKIESRTES 214

Query: 356 LKEIGDVENWARSIENDMKIITDTLERAYEKAQE 457
           L++  D       +     +  D LER YE+ ++
Sbjct: 215 LEKSVD------EVNAKPWVTKDELERIYEELKK 242


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,716,585
Number of Sequences: 28952
Number of extensions: 169448
Number of successful extensions: 545
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)