Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d03
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.      30   8.6  
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote...    30   8.6  

>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
          Length = 1411

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 23/67 (34%), Positives = 34/67 (50%)
 Frame = +2

Query: 461 GDCKKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKA 640
           G  KKL    L +VKA  K   +Q+LQ Q+ L   L    E+R   L   +  ++  + +
Sbjct: 730 GQIKKLEADSL-EVKAS-KEQALQDLQQQRQLNTDL----ELRATELSKQLEMEKEIVSS 783

Query: 641 LQLDLQK 661
            +LDLQK
Sbjct: 784 TRLDLQK 790


>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
           protein.
          Length = 1410

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 23/67 (34%), Positives = 34/67 (50%)
 Frame = +2

Query: 461 GDCKKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKA 640
           G  KKL    L +VKA  K   +Q+LQ Q+ L   L    E+R   L   +  ++  + +
Sbjct: 730 GQIKKLEADSL-EVKAS-KEQALQDLQQQRQLNTDL----ELRATELSKQLEMEKEIVSS 783

Query: 641 LQLDLQK 661
            +LDLQK
Sbjct: 784 TRLDLQK 790


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,891,689
Number of Sequences: 237096
Number of extensions: 1518338
Number of successful extensions: 3405
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3405
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)