Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10d03
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical pr... 31 0.57
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical... 28 5.3
AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical... 28 5.3
AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical ... 28 5.3
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL021491-4|CAA16374.2| 324|Caenorhabditis elegans Hypothetical ... 28 7.0
Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical
protein C53D6.5 protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +2
Query: 464 DCKKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKAL 643
+ K +R + ++ + K D + K+ + L K+++ R+NR+K I A LK
Sbjct: 79 ELNKFFRQRTEKLEIEQKLKDPKL---DKATSDELKKQWQERINRIKKYIEASDDKLKGY 135
Query: 644 QLDLQKYXKK 673
QK KK
Sbjct: 136 DNHTQKIVKK 145
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 491 LGDVKAQMKASDVQNLQNQKSLL-ESLAK--EYEMRVNRLKNVISAKRGYLKALQLDLQK 661
L + ++Q + S L+N++SLL ES AK EY R+ +L+ + K L + +L+
Sbjct: 69 LAEYRSQHQRSTRSELENEESLLEESSAKEEEYLQRIAKLEADLKKKEQELAEKKEELES 128
Query: 662 YXKK 673
KK
Sbjct: 129 IEKK 132
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 452 NDVGDCKKLW---RPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRV 592
+++GD KK+ R + + QMK S+ Q ++N + +ESL K +E ++
Sbjct: 516 SELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQI 565
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 452 NDVGDCKKLW---RPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRV 592
+++GD KK+ R + + QMK S+ Q ++N + +ESL K +E ++
Sbjct: 584 SELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQI 633
>AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical
protein Y105E8A.10c protein.
Length = 922
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 123 DRNT*FKIHITQNYNSLRNNHNYFIYFVWPSVRL 22
D N + + ++Y L N H F++ WP+VR+
Sbjct: 583 DLNMKYVLTSWRDYVVLSNEHEDFLFHTWPAVRM 616
>AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical
protein Y105E8A.10b protein.
Length = 930
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 123 DRNT*FKIHITQNYNSLRNNHNYFIYFVWPSVRL 22
D N + + ++Y L N H F++ WP+VR+
Sbjct: 591 DLNMKYVLTSWRDYVVLSNEHEDFLFHTWPAVRM 624
>AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical
protein Y105E8A.10a protein.
Length = 959
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 123 DRNT*FKIHITQNYNSLRNNHNYFIYFVWPSVRL 22
D N + + ++Y L N H F++ WP+VR+
Sbjct: 620 DLNMKYVLTSWRDYVVLSNEHEDFLFHTWPAVRM 653
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 521 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 628
S+ Q +Q K+L+ L E + RVNR+K + +RG
Sbjct: 32 SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 521 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 628
S+ Q +Q K+L+ L E + RVNR+K + +RG
Sbjct: 32 SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 521 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 628
S+ Q +Q K+L+ L E + RVNR+K + +RG
Sbjct: 32 SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = -1
Query: 435 FSRISNFSGILSYSHILLISCTISSNIPCFKQLNMGNHFTRRNFALGTVSKKSSSLTRFT 256
+ I + +G L +L+I + P + LN+ N +R++ + + K+ R T
Sbjct: 456 YGTIIDQTGNLKQKEVLVIPA-LEMTYPQLR-LNLSNFLSRKDLVIEHLLNKTIQTFRET 513
Query: 255 MFPNSFNMTRLSK 217
++P+S T +SK
Sbjct: 514 IWPSSHVPTNISK 526
>AL021491-4|CAA16374.2| 324|Caenorhabditis elegans Hypothetical
protein Y44A6B.2 protein.
Length = 324
Score = 27.9 bits (59), Expect = 7.0
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = -1
Query: 270 LTRFTMFPNSFNMTRLSKGTSEFNISTSFSRSAKFSLIFIFSTLIAIKIDRNT*FKIHIT 91
+ +F + N+T L F++ +KF I+I++T+IA +D F I IT
Sbjct: 1 MVQFFLVFGFINLTSLLFNALVFHVIYKQVDKSKFPTIYIYNTIIANSMDT---FLILIT 57
Query: 90 QNYNSLRNNHNYFIY--FVWPSVRLFQTFF 7
+ ++ YF + F S+ + TFF
Sbjct: 58 FIIPIVLDDKVYFEFRRFAGSSLTIVGTFF 87
>Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical
protein F02D10.4 protein.
Length = 369
Score = 27.5 bits (58), Expect = 9.2
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = -1
Query: 420 NFSGILSYSHILLISCTISSNIPCFKQLNMGNHFTRRNFALGTVSKKSSSLTRFTMFPNS 241
NF+ LS ++ C +S +PC K N ++ + SK ++ L F+
Sbjct: 245 NFTISLSSGICIITDCHVSIIMPCRKDFFQKNGESKTDRDCSGPSKSAAPLINFSRI--- 301
Query: 240 FNMTRLSKGTSEFNISTSFSRSAKFSLIFIFSTLIAIK 127
F + + S +STS + S LI FS +K
Sbjct: 302 FILEKDSNSPGTSALSTSKAVSENQILIIKFSIFRPLK 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,526,278
Number of Sequences: 27780
Number of extensions: 280133
Number of successful extensions: 946
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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