Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c22
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   3.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   5.0  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 136 NATKSSGLTSPLSVSTSPPGKPAT 159


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 136 NATKSSGLTSPLSVSTSPPGKPAT 159


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 136 NATKSSGLTSPLSVSTSPPGKPAT 159


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 136 NATKSSGLTSPLSVSTSPPGKPAT 159


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 136 NATKSSGLTSPLSVSTSPPGKPAT 159


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 92  NATKSSGLTSPLSVSTSPPGKPAT 115


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 136 NATKSSGLTSPLSVSTSPPGKPAT 159


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSKWAS 308
           N+TKS+ ++S +SV  S P K A+
Sbjct: 136 NATKSSGLTSPLSVSTSPPGKPAT 159


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 237 NSTKSTMMSSRVSVGCSCPSK 299
           N+TKS+ ++S +SV  S P K
Sbjct: 136 NATKSSGLTSPLSVSTSPPGK 156


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 602 DVLR*CSRILCRQKS*WESSRRHSFSQTRRPFP 504
           DV+    R++    + W S R H++  T   +P
Sbjct: 55  DVMADIERVIMPGVTHWHSPRFHAYFPTANSYP 87


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 439 NFEVSSQSGSSYLRSCR 489
           N EVSS S +  ++SCR
Sbjct: 53  NSEVSSNSYTPKIKSCR 69


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 585 QQNSLPAEKLVGIQSPPQFFTNKKAFSLL 499
           ++ SLP  KL+ ++     F N  + SLL
Sbjct: 595 RKKSLPVRKLLELERAQHEFKNGDSSSLL 623


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,479
Number of Sequences: 336
Number of extensions: 2613
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)