Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c22
         (648 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein si...    30   1.5  
At3g01840.1 68416.m00125 protein kinase family protein contains ...    29   2.0  
At1g13750.1 68414.m01614 calcineurin-like phosphoesterase family...    29   2.0  
At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family...    28   6.1  
At3g49620.1 68416.m05423 2-oxoacid-dependent oxidase, putative (...    27   8.1  
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family...    27   8.1  
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family...    27   8.1  

>At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein
           similar to elicitor inducible chitinase Nt-SubE76
           GI:11071974 from [Nicotiana tabacum]
          Length = 488

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 508 FPIDIAFYSSADNWTRFGKILQNYIKARTDTMLEATRATG 389
           FP D AF++  +  +  G I  N   A  DT+L + +A G
Sbjct: 219 FPFDYAFFNGQNTVSDNGVIYTNVFDANFDTLLASLKALG 258


>At3g01840.1 68416.m00125 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 654

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 186 LEGNSRDMT*KKRNPPKNSTK-STMMSSRVSVGCSCPSKWASKKVDAVDLGAHLKESLSS 362
           L+G +  ++ +++NP  +  K    +  R+++ CSCP +  S     V     +++S+SS
Sbjct: 128 LQGLTTCLSIREKNPHISEDKLGDNIKLRLAIRCSCPQEGVSNASFLVTYPVGVRDSVSS 187

Query: 363 LMI 371
           L +
Sbjct: 188 LAV 190


>At1g13750.1 68414.m01614 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 613

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = -3

Query: 625 FMIVLAFVMFSVSAAEFFAGRKASGNPVAATVFHKQEGLFPIDIAFYSSADNWTRFGKIL 446
           ++I LA  +   S+  F+A   +   P+      K    + +DIA Y  A N+ R   + 
Sbjct: 452 WLIFLAHRVLGYSSTYFYAEEGSFAEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPVY 511

Query: 445 QN 440
           Q+
Sbjct: 512 QS 513


>At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 611

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -3

Query: 625 FMIVLAFVMFSVSAAEFFAGRKASGNPVAATVFHKQEGLFPIDIAFYSSADNWTRFGKIL 446
           ++I +A  +   S  +++    +   P+      K    + +DIAFY    N+ R   I 
Sbjct: 450 WLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERTCPIY 509

Query: 445 QN 440
           QN
Sbjct: 510 QN 511


>At3g49620.1 68416.m05423 2-oxoacid-dependent oxidase, putative
           (DIN11) identical to partial cds of 2-oxoacid-dependent
           oxidase (din11) from GI:10834554 [Arabidopsis thaliana];
           identical to cDNA 2-oxoacid-dependent oxidase (din11)
           GI:10834553; contains Pfam profile PF03171:
           oxidoreductase, 2OG-Fe(II) oxygenase family
          Length = 357

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 506 EKAFLFVKNCGGDWIPTSFSAGKEFCCTNGE 598
           +K  L VKN  GDWIP     G  F C  G+
Sbjct: 245 DKTALQVKNVDGDWIPAIPIPG-SFICNIGD 274


>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
           protein similar to SP|P17213 Bactericidal
           permeability-increasing protein precursor (BPI) {Homo
           sapiens}; contains Pfam profile PF02886: LBP / BPI /
           CETP family, C-terminal domain
          Length = 515

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 487 YSSADNWTRFGKILQNYIKARTDTMLEA 404
           +++   W++ G+   NY++A T  +LEA
Sbjct: 440 FNATMKWSKIGEFQTNYVQAATSRILEA 467


>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
           protein similar to SP|P17213 Bactericidal
           permeability-increasing protein precursor (BPI) {Homo
           sapiens}; contains Pfam profile PF02886: LBP / BPI /
           CETP family, C-terminal domain
          Length = 722

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 487 YSSADNWTRFGKILQNYIKARTDTMLEA 404
           +++   W++ G+   NY++A T  +LEA
Sbjct: 647 FNATMKWSKIGEFQTNYVQAATSRILEA 674


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,509,382
Number of Sequences: 28952
Number of extensions: 223823
Number of successful extensions: 563
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)