Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c20
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.5  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 407 KSNV*QXXXKIFVRSPFFLFLIWMDELT 324
           K NV Q    +F+    +LF++W+  L+
Sbjct: 140 KKNVTQQNSDVFIFDNVWLFILWVGILS 167


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 370 TKIFFFFCYTFDLV*LPLIN 429
           T IFFFF    D + L ++N
Sbjct: 72  THIFFFFAICCDFIALIVVN 91


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 6   KKFAGYYTYRSGIGHYDIC 62
           K  A YY  RSG+ ++  C
Sbjct: 570 KNCAAYYVCRSGLSYHLSC 588


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 588 TYLFVIIYFSKSSNN 632
           TYL + I F +SSN+
Sbjct: 376 TYLVIFIQFDQSSNS 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,144
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)