Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10c20
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U38254-1|AAC50283.1| 638|Homo sapiens amiloride sensitive sodiu... 31 2.6
DQ898176-1|ABI64069.1| 704|Homo sapiens sodium channel nonvolta... 31 2.6
DQ898175-1|ABI64068.1| 638|Homo sapiens sodium channel nonvolta... 31 2.6
BC125075-1|AAI25076.1| 378|Homo sapiens SCNN1D protein protein. 31 2.6
BC125074-1|AAI25075.1| 638|Homo sapiens sodium channel, nonvolt... 31 2.6
AL162741-20|CAI23262.1| 638|Homo sapiens sodium channel, nonvol... 31 2.6
AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel, nonvol... 31 2.6
AK131558-1|BAD18692.1| 669|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens ... 31 2.6
>U38254-1|AAC50283.1| 638|Homo sapiens amiloride sensitive sodium
channel delta subunit protein.
Length = 638
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 175 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 225
>DQ898176-1|ABI64069.1| 704|Homo sapiens sodium channel
nonvoltage-gated 1 delta protein.
Length = 704
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 241 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 291
>DQ898175-1|ABI64068.1| 638|Homo sapiens sodium channel
nonvoltage-gated 1 delta protein.
Length = 638
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 175 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 225
>BC125075-1|AAI25076.1| 378|Homo sapiens SCNN1D protein protein.
Length = 378
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 175 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 225
>BC125074-1|AAI25075.1| 638|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 638
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 175 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 225
>AL162741-20|CAI23262.1| 638|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 638
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 175 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 225
>AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 704
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 241 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 291
>AK131558-1|BAD18692.1| 669|Homo sapiens protein ( Homo sapiens
cDNA FLJ16802 fis, clone TESTI4005158, highly similar
to Amiloride-sensitive sodium channel delta-subunit. ).
Length = 669
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 206 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 256
>AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ35920 fis, clone TESTI2010591, highly similar to
AMILORIDE-SENSITIVE SODIUM CHANNEL DELTA-SUBUNIT. ).
Length = 704
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 284 SAT*MRHPP*EVLRSQV*LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 132
SAT RH P L ++ LQRL H +R + N GG + RG T G
Sbjct: 241 SATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGYTSG 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,321,078
Number of Sequences: 237096
Number of extensions: 1576238
Number of successful extensions: 4478
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4478
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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