Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c19
         (379 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX648771-1|CAE46198.1| 1956|Homo sapiens hypothetical protein pr...    31   1.2  
X54131-1|CAA38066.1| 1997|Homo sapiens protein-tyrosine phosphat...    29   3.8  
BC113463-1|AAI13464.1| 1997|Homo sapiens protein tyrosine phosph...    29   3.8  
BC101679-1|AAI01680.1| 1997|Homo sapiens protein tyrosine phosph...    29   3.8  

>BX648771-1|CAE46198.1| 1956|Homo sapiens hypothetical protein
            protein.
          Length = 1956

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 343  PPRLRPI-MYCIHRHGANKLIYQTKIYISCFVRKPNSSSGNTFKLHL 206
            P +  P+  Y  +RH A+  +YQT  + S  V  PNS+S  +F + L
Sbjct: 1462 PEQQHPLPSYLEYRHNASIRVYQTNYFASKCVENPNSNS-KSFNIKL 1507


>X54131-1|CAA38066.1| 1997|Homo sapiens protein-tyrosine phosphatase
            protein.
          Length = 1997

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 343  PPRLRPI-MYCIHRHGANKLIYQTKIYISCFVRKPNSSSGNTFKLHL 206
            P +  P+  Y  +RH A+  +YQT  + S     PNS+S  +F + L
Sbjct: 1503 PEQQHPLPSYLEYRHNASIRVYQTNYFASKCAENPNSNS-KSFNIKL 1548


>BC113463-1|AAI13464.1| 1997|Homo sapiens protein tyrosine
            phosphatase, receptor type, B protein.
          Length = 1997

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 343  PPRLRPI-MYCIHRHGANKLIYQTKIYISCFVRKPNSSSGNTFKLHL 206
            P +  P+  Y  +RH A+  +YQT  + S     PNS+S  +F + L
Sbjct: 1503 PEQQHPLPSYLEYRHNASIRVYQTNYFASKCAENPNSNS-KSFNIKL 1548


>BC101679-1|AAI01680.1| 1997|Homo sapiens protein tyrosine
            phosphatase, receptor type, B protein.
          Length = 1997

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 343  PPRLRPI-MYCIHRHGANKLIYQTKIYISCFVRKPNSSSGNTFKLHL 206
            P +  P+  Y  +RH A+  +YQT  + S     PNS+S  +F + L
Sbjct: 1503 PEQQHPLPSYLEYRHNASIRVYQTNYFASKCAENPNSNS-KSFNIKL 1548


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,397,398
Number of Sequences: 237096
Number of extensions: 990621
Number of successful extensions: 1298
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)