Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10c18
(672 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36190.1 68417.m05149 serine carboxypeptidase S28 family prot... 100 8e-22
At4g36195.1 68417.m05150 serine carboxypeptidase S28 family prot... 95 5e-20
At2g24280.1 68415.m02901 serine carboxypeptidase S28 family prot... 77 1e-14
At5g65760.1 68418.m08275 serine carboxypeptidase S28 family prot... 76 2e-14
At5g22860.2 68418.m02673 serine carboxypeptidase S28 family prot... 59 2e-09
At5g22860.1 68418.m02672 serine carboxypeptidase S28 family prot... 59 2e-09
At3g26520.1 68416.m03310 tonoplast intrinsic protein, putative s... 30 1.6
At2g36830.1 68415.m04516 major intrinsic family protein / MIP fa... 30 1.6
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 29 2.8
At4g13460.1 68417.m02102 SET domain-containing protein (SUVH9) i... 29 3.7
At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase / x... 28 6.5
At1g11710.1 68414.m01344 pentatricopeptide (PPR) repeat-containi... 28 6.5
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 28 6.5
At4g02540.1 68417.m00347 DC1 domain-containing protein contains ... 27 8.6
At3g30220.1 68416.m03819 hypothetical protein 27 8.6
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 27 8.6
At1g14185.1 68414.m01678 glucose-methanol-choline (GMC) oxidored... 27 8.6
>At4g36190.1 68417.m05149 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 493
Score = 100 bits (240), Expect = 8e-22
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Frame = +3
Query: 288 WFKQKLDHSNPSDLRTWKQRYYVNDSFYDFKN--QGPVFLMIGGEGPADARWMVTGTWIN 461
WF Q LDH +PSD R ++QRYY + D GP+FLMI GEGP + +T +I+
Sbjct: 49 WFTQTLDHYSPSDHRKFRQRYY---EYLDHLRVPDGPIFLMICGEGPCNG---ITNNYIS 102
Query: 462 Y-AKKFNALYINLEHRFYGESHPTLDLSIKNLQFLSSYQALADLANF 599
AKKF+A ++LEHR+YG+S P L+ KNL++LSS QAL+DLA F
Sbjct: 103 VLAKKFDAGIVSLEHRYYGKSSPFKSLATKNLKYLSSKQALSDLATF 149
>At4g36195.1 68417.m05150 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 488
Score = 94.7 bits (225), Expect = 5e-20
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Frame = +3
Query: 288 WFKQKLDHSNPSDLRTWKQRYYVNDSFYDFKN--QGPVFLMIGGEGPADARWMVTGTWIN 461
WF Q LDH +PSD R +KQRYY + D GP+F+MI GEGP + + +I
Sbjct: 49 WFNQTLDHYSPSDHREFKQRYY---EYLDHLRVPDGPIFMMICGEGPCNG---IPNDYIT 102
Query: 462 Y-AKKFNALYINLEHRFYGESHPTLDLSIKNLQFLSSYQALADLANF 599
AKKF+A ++LEHR+YG+S P L+ +NL++LSS QAL DLA F
Sbjct: 103 VLAKKFDAGIVSLEHRYYGKSSPFKSLATENLKYLSSKQALFDLAAF 149
>At2g24280.1 68415.m02901 serine carboxypeptidase S28 family protein
contains Pfam profile: PF05577 Serine carboxypeptidase
S28
Length = 494
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Frame = +3
Query: 285 QWFKQKLDHSN--PSDLRTWKQRYYVNDSFYDFKNQGPVFLMIGGEGPADARWMVTGTWI 458
++F Q LDH + P + + Q+Y +N+ F+ + GP+F+ G EG D TG +
Sbjct: 49 RYFPQNLDHFSFTPDSYKVFHQKYLINNRFW--RKGGPIFVYTGNEGDIDWFASNTGFML 106
Query: 459 NYAKKFNALYINLEHRFYGESHP---TLDLSIKNLQFLSSYQALADLANFISS 608
+ A KF AL + +EHRFYGES P S + L +L+S QALAD A I S
Sbjct: 107 DIAPKFRALLVFIEHRFYGESTPFGKKSHKSAETLGYLNSQQALADYAILIRS 159
>At5g65760.1 68418.m08275 serine carboxypeptidase S28 family protein
similar to SP|P42785 Lysosomal Pro-X carboxypeptidase
precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP)
(Proline carboxypeptidase) {Homo sapiens}; contains Pfam
profile PF05577: Serine carboxypeptidase S28
Length = 515
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Frame = +3
Query: 255 GDYQSNLPPPQWFKQKLDHSNPSDLRTWKQRYYVN-DSFYDFKNQGPVFLMIGGEGPADA 431
GD ++F Q+LDH + +DL + QRY +N D + GP+FL G EG D
Sbjct: 51 GDRNEYRYETKFFSQQLDHFSFADLPKFSQRYLINSDHWLGASALGPIFLYCGNEG--DI 108
Query: 432 RWMVTGTWI--NYAKKFNALYINLEHRFYGESHP--TLDLSIKN---LQFLSSYQALADL 590
W T + + A KF AL + EHR+YGES P + + + KN L +L++ QALAD
Sbjct: 109 EWFATNSGFIWDIAPKFGALLVFPEHRYYGESMPYGSREEAYKNATTLSYLTTEQALADF 168
Query: 591 ANFISS*NRS 620
A F++ R+
Sbjct: 169 AVFVTDLKRN 178
>At5g22860.2 68418.m02673 serine carboxypeptidase S28 family protein
contains Pfam profile: PF05577 serine carboxypeptidase
S28
Length = 439
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Frame = +3
Query: 264 QSNLPPPQWFKQKLDHSN--PSDLRTWKQRYYVNDSFYD-FKNQGPVFLMIGGEGPADAR 434
+SNL +F Q LDH P T++QRY ++ + + K P+ +G E D+
Sbjct: 51 ESNLKM-YYFNQTLDHFTFTPESYMTFQQRYAIDSTHWGGAKANAPILAFLGEESSLDSD 109
Query: 435 WMVTGTWINYAKKFNALYINLEHRFYGESHP--TLDLSIKN---LQFLSSYQALADLA 593
G + + NAL + +EHR+YGE+ P + + ++KN L +L++ QALAD A
Sbjct: 110 LAAIGFLRDNGPRLNALLVYIEHRYYGETMPFGSAEEALKNASTLGYLNAAQALADYA 167
>At5g22860.1 68418.m02672 serine carboxypeptidase S28 family protein
contains Pfam profile: PF05577 serine carboxypeptidase
S28
Length = 502
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Frame = +3
Query: 264 QSNLPPPQWFKQKLDHSN--PSDLRTWKQRYYVNDSFYD-FKNQGPVFLMIGGEGPADAR 434
+SNL +F Q LDH P T++QRY ++ + + K P+ +G E D+
Sbjct: 51 ESNLKM-YYFNQTLDHFTFTPESYMTFQQRYAIDSTHWGGAKANAPILAFLGEESSLDSD 109
Query: 435 WMVTGTWINYAKKFNALYINLEHRFYGESHP--TLDLSIKN---LQFLSSYQALADLA 593
G + + NAL + +EHR+YGE+ P + + ++KN L +L++ QALAD A
Sbjct: 110 LAAIGFLRDNGPRLNALLVYIEHRYYGETMPFGSAEEALKNASTLGYLNAAQALADYA 167
>At3g26520.1 68416.m03310 tonoplast intrinsic protein, putative
similar to tonoplast intrinsic protein GI:5081419 from
[Brassica napus]
Length = 253
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 461 INPSSCHHPSCISWTLTTNHQKYWA 387
+NP+ P+ +SWT TNH YWA
Sbjct: 199 MNPAVAFGPAVVSWT-WTNHWVYWA 222
>At2g36830.1 68415.m04516 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 251
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 461 INPSSCHHPSCISWTLTTNHQKYWA 387
+NP+ P+ +SWT TNH YWA
Sbjct: 198 MNPAVAFGPAVVSWT-WTNHWVYWA 221
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 246 IPGGDYQSNLPPPQWFKQKLDHSNPSDLRTWKQ 344
+P GD+ S + P +FK ++ PS ++ W++
Sbjct: 144 LPEGDFLSRIGPTDFFKDLEKYAGPSAVQEWEK 176
>At4g13460.1 68417.m02102 SET domain-containing protein (SUVH9)
identical to SUVH9 [Arabidopsis thaliana] GI:13517759;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH9 (SUVH9) GI:13517758
Length = 650
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 444 SPSILHQLDPHHQSSKILGLDF*NHKNCHLHNSAVSKFEDRMDLS 310
SPS++ +L+P +S++ L N L +SAVS F + D S
Sbjct: 15 SPSLIPKLEPVTESTQNLAFQLPNTNPQALISSAVSDFNEATDFS 59
>At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (XTR3) identical to endoxyloglucan
transferase GI:5533317 from [Arabidopsis thaliana]
Length = 284
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 225 SNGGNLGIPGGDYQSNLPPPQWFKQKLDHSNPSDLRTWKQRYYVNDSFYDFK 380
S+GG P G P+WF Q+LD + +R +++Y + + D K
Sbjct: 228 SSGGRSSCPAGS-------PRWFSQRLDLTAEDKMRVVQRKYMIYNYCTDTK 272
>At1g11710.1 68414.m01344 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 657
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 537 DPKWDDSLHKNDVLNLYKVH*TSLHN*SKFLSPSILHQLDPHHQSSKILGLDF*NHKNCH 358
+P+ +D L LNL + +LH S L+ ++ ++ +SS L L+F N
Sbjct: 25 NPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLISRVLREFRSSPKLALEF---YNWV 81
Query: 357 LHNSAVSKFEDRMDLS 310
L ++ V+K E+R + S
Sbjct: 82 LRSNTVAKSENRFEAS 97
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/84 (27%), Positives = 33/84 (39%)
Frame = +3
Query: 312 SNPSDLRTWKQRYYVNDSFYDFKNQGPVFLMIGGEGPADARWMVTGTWINYAKKFNALYI 491
S+ ++LR W R Y +G + E D RW+V+G N K ++
Sbjct: 68 SSDTNLRVWDTRKKGCIQTYKGHTRGISTI----EFSPDGRWVVSGGLDNVVKVWDLTAG 123
Query: 492 NLEHRFYGESHPTLDLSIKNLQFL 563
L H F P L L+FL
Sbjct: 124 KLLHEFKCHEGPIRSLDFHPLEFL 147
>At4g02540.1 68417.m00347 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 822
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 500 F*IYIKCIELLCIINPSSCHHPSCISWTLTTNHQKYWA 387
F I+ KC L +I S HP IS+T + + +KYW+
Sbjct: 430 FVIHQKCFSLPRVIRIS--RHPHRISFTPSFDPEKYWS 465
>At3g30220.1 68416.m03819 hypothetical protein
Length = 145
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 258 DYQSNLPPPQWFKQKLDHSNPSDLRTWKQRYYVNDSFYDFKNQ 386
DY S+LPP W + D WK+ N+ D KN+
Sbjct: 94 DYASDLPPCPWSSPSEEDDEEEDSNHWKR--VKNEPEVDDKNE 134
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 426 DARWMVTGTWINYAKKFNALYINLEHRFYGESHPTLDLSIKNLQFL 563
D RW+V+G N K ++ L H F P L L+FL
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFL 198
>At1g14185.1 68414.m01678 glucose-methanol-choline (GMC)
oxidoreductase family protein similar to mandelonitrile
lyase from Prunus serotina [SP|P52706, SP|P52707];
contains Pfam profile PF00732 GMC oxidoreductase
Length = 503
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 189 SVDGVKKFHLGRSNGGNLGIPGGDY 263
SVDG+K H GR GG+ I GG Y
Sbjct: 101 SVDGIKN-HRGRVLGGSSAINGGFY 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,661,282
Number of Sequences: 28952
Number of extensions: 304463
Number of successful extensions: 835
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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