Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c15
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    27   0.49 
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    23   6.0  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 27.1 bits (57), Expect = 0.49
 Identities = 25/90 (27%), Positives = 39/90 (43%)
 Frame = +3

Query: 135 FCFPLRRGLIAFAYTNLILTLVVTSFLSLYISVIRNXXXXXXXEMASELIRLIVDTVALL 314
           F   LRR  + F   NLI+  V  SFLS+ +  + +          S L+ L V    LL
Sbjct: 231 FNITLRRKTL-FYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTV-FFLLL 288

Query: 315 IEVTMTTVFVVALHKKHVLLMKLYLYFEII 404
            E+   T   V L  K++L   + +   ++
Sbjct: 289 AEIIPPTSLTVPLLGKYLLFTMMLVTLSVV 318


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 147 LRRGLIAFAYTNLILTLVVTSFLSLYISVI 236
           L  G++ F Y  L+ T    SFL+ +IS +
Sbjct: 34  LLTGIMQFVYCCLVGTFPFNSFLAGFISTV 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,914
Number of Sequences: 2352
Number of extensions: 11644
Number of successful extensions: 80
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)